Reactome: A Curated Pathway Database

Version 46 Released

Posted on September 23rd, 2013, by robinhaw, under Reactome Announcement

Topics with new or revised events include Disease (Defects in biotin metabolismDefects in cobalamin (B12) metabolism and TGF-beta receptor complex signaling in cancer), Signal transduction (Signaling by Leptin), Extracellular matrix organization (Degradation of the extracellular matrixLaminin interactions, and Integrin cell surface interactions), Transmembrane transport of small molecules (TRP channels), Cell cycle (Regulation of PLK1 activity at G2/M transition), and Cellular response to stress (Cellular senescence). Rosemary J AkhurstWytse BruinsmaLei HeDominique MeyerSteven W PolyakSylvie Ricard-BlumShamith SamarajiwaThomas Scherer, and David Watkins are our external reviewers. Plant Reactome has released a new batch of rice pathways associated with cofactor biosynthesishormone biosnythesis, and fatty acids & lipids biosynthesis. Examples include: pyridoxamine anabolismABA biosynthesis and mediated signaling and glycolipid desaturation. The Reactome FI plugin, which was designed to find network patterns related to cancer and other types of diseases within a gene list, has been upgraded to support Cytoscape v3, and is now available at the Cytoscape app store.

Reactome@ISMB2013

Posted on September 19th, 2013, by robinhaw, under Conference and Meeting

ISMB2013 is in Berlin this year and Reactome will be there. Robin Haw will be talking at the Network Biology SIG Meeting on Friday, July 19th and presenting a poster at the main ISMB conference (A078).