BioPAX pathway converted from "Core MLL complex methylates H3K4Me2-Nucleosome at the GP1BA gene promoter" in the Reactome database.
Core MLL complex methylates H3K4Me2-Nucleosome at the GP1BA gene promoter
Core MLL complex methylates H3K4Me2-Nucleosome at the GP1BA gene promoter
This event has been computationally inferred from an event that has been demonstrated in another species.<p>The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.<p><a href='/electronic_inference_compara.html' target = 'NEW'>More details and caveats of the event inference in Reactome.</a> For details on PANTHER see also: <a href='http://www.pantherdb.org/about.jsp' target='NEW'>http://www.pantherdb.org/about.jsp</a>
Reactome DB_ID: 77087
2
nucleoplasm
GO
0005654
S-adenosyl-L-methionine [ChEBI:15414]
S-adenosyl-L-methionine
Reactome
http://www.reactome.org
ChEBI
15414
Reactome DB_ID: 10740228
1
H3K4me2-Nucleosome:GP1BA gene:RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B [nucleoplasm]
H3K4me2-Nucleosome:GP1BA gene:RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B
Reactome DB_ID: 10740219
1
Ghost homologue of GP1BA gene [nucleoplasm]
Ghost homologue of GP1BA gene
Reactome DB_ID: 10740147
1
Nucleosome with H3K4me2 [nucleoplasm]
Nucleosome with H3K4me2
Reactome DB_ID: 10715458
2
Ghost homologue of HIST1H4 [nucleoplasm]
Ghost homologue of HIST1H4
Converted from EntitySet in Reactome
Reactome DB_ID: 10740145
2
Histone H3 (H3K4me2) [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
His3.3A [nucleoplasm]
His3.3B [nucleoplasm]
His3:CG33845 [nucleoplasm]
Drosophila melanogaster
NCBI Taxonomy
7227
UniProt
C0HL66
UniProt
C0HL67
UniProt
P02299
Converted from EntitySet in Reactome
Reactome DB_ID: 10715467
2
Histone H2A [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
Converted from EntitySet in Reactome
Reactome DB_ID: 10715476
2
Histone H2B [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
Reactome Database ID Release 83
10740147
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740147
Reactome
R-DME-1214200
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-1214200.1
Reactome DB_ID: 10740173
1
RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B [nucleoplasm]
RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B
Reactome DB_ID: 10705715
1
UniProt:M9MS40
UniProt
M9MS40
Chain Coordinates
2
EQUAL
2414
EQUAL
Reactome DB_ID: 10712244
1
UniProt:Q9VTZ1
Gcn5
UniProt
Q9VTZ1
1
EQUAL
832
EQUAL
Reactome DB_ID: 10740171
1
Core MLL complex [nucleoplasm]
Core MLL complex
Reactome DB_ID: 10716204
1
UniProt:Q9VPH8
Rbbp5
UniProt
Q9VPH8
1
EQUAL
538
EQUAL
Reactome DB_ID: 10716199
1
UniProt:Q94545
ash2
UniProt
Q94545
1
EQUAL
628
EQUAL
Reactome DB_ID: 10740169
1
Ghost homologue of DPY30 [nucleoplasm]
Ghost homologue of DPY30
Converted from EntitySet in Reactome
Reactome DB_ID: 10740167
1
KMT2A-E, SETD1A,(SETD1B) [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
KMT2A [nucleoplasm]
upSET [nucleoplasm]
KMT2B [nucleoplasm]
Lpt [nucleoplasm]
Set1 [nucleoplasm]
UniProt
P20659
UniProt
Q9VUB5
UniProt
Q9W1H0
UniProt
Q5LJZ2
Reactome DB_ID: 10718887
1
UniProt:Q9V3J8
wds
UniProt
Q9V3J8
2
EQUAL
334
EQUAL
Reactome Database ID Release 83
10740171
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740171
Reactome
R-DME-5244738
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-5244738.1
Converted from EntitySet in Reactome
Reactome DB_ID: 10740076
1
RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1 [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
Reactome DB_ID: 10740149
1
GATA1:ZFPM1 [nucleoplasm]
GATA1:ZFPM1
Reactome DB_ID: 10704943
1
UniProt:Q9VPQ6
UniProt
Q9VPQ6
1
EQUAL
1006
EQUAL
Reactome DB_ID: 10704952
1
UniProt:P91623
grn
UniProt
P91623
1
EQUAL
413
EQUAL
Reactome Database ID Release 83
10740149
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740149
Reactome
R-DME-8936469
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-8936469.1
Reactome Database ID Release 83
10740173
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740173
Reactome
R-DME-8936477
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-8936477.1
Reactome Database ID Release 83
10740228
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740228
Reactome
R-DME-8936615
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-8936615.1
Reactome DB_ID: 10740230
1
H3K4me3-Nucleosome:GP1BA gene:RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B [nucleoplasm]
H3K4me3-Nucleosome:GP1BA gene:RUNX1,MeR206,MeR210-RUNX1:CBFB:PRMT1:GATA1:ZFPM1:Core MLL complex:EP300:KAT2B
Reactome DB_ID: 10740219
1
Reactome DB_ID: 10740190
1
Nucleosome with H3K4me3 [nucleoplasm]
Nucleosome with H3K4me3
Reactome DB_ID: 10715458
2
Converted from EntitySet in Reactome
Reactome DB_ID: 10715467
2
Converted from EntitySet in Reactome
Reactome DB_ID: 10715476
2
Converted from EntitySet in Reactome
Reactome DB_ID: 10740188
2
Histone H3 (H3K4me3) [nucleoplasm]
Converted from EntitySet in Reactome. Each synonym is a name of a PhysicalEntity, and each XREF points to one PhysicalEntity
His3.3A [nucleoplasm]
His3:CG33845 [nucleoplasm]
His3.3B [nucleoplasm]
Reactome Database ID Release 83
10740190
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740190
Reactome
R-DME-1214169
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-1214169.1
Reactome DB_ID: 10740173
1
Reactome Database ID Release 83
10740230
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740230
Reactome
R-DME-8936620
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-8936620.1
Reactome DB_ID: 77502
2
S-adenosyl-L-homocysteine [ChEBI:16680]
S-adenosyl-L-homocysteine
ChEBI
16680
PHYSIOL-LEFT-TO-RIGHT
ACTIVATION
Reactome DB_ID: 10740228
GO
0042800
GO molecular function
Reactome Database ID Release 83
10740231
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740231
Reactome Database ID Release 83
10740233
Database identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=10740233
Reactome
R-DME-8936621
1
Reactome stable identifier. Use this URL to connect to the web page of this instance in Reactome: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=R-DME-8936621.1
The WDR5-containing histone methyltransferase MLL complex, recruited to the GP1BA promoter via RUNX1 (and possibly GATA1), methylates histone H3 on dimethylated lysine residue K4 (K5 when taking into account the initiator methionine), producing the H3K4me3 mark. The H3K4me3 mark is characteristic of nucleosome associated with transcriptionally active promoters of megakaryocyte-specific genes (Herglotz et al. 2013).
22777353
Pubmed
2013
Histone arginine methylation keeps RUNX1 target genes in an intermediate state
Herglotz, J
Kuvardina, O N
Kolodziej, S
Kumar, A
Hussong, H
Grez, M
Lausen, J
Oncogene 32:2565-75
inferred by electronic annotation
IEA
GO
IEA