Reactome: A Curated Pathway Database
Attention
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Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
__is_ghost 1 OTHER N/A DatabaseObject   ENUM('TRUE')
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
Compartment created 1
Person created 1
Edge created 1
FunctionalStatusType created 1
ReactionVertex created 1
SimpleEntity created 1
CatalystActivity created 1
BlackBoxEvent created 1
StableIdentifier created 1
Disease created 1
_Deleted created 1
NegativeRegulation created 1
ModifiedResidue created 1
Taxon created 1
EntityFunctionalStatus created 1
PathwayCoordinates created 1
ConcurrentEventSet created 1
OtherEntity created 1
Depolymerisation created 1
PhysicalEntity created 1
FailedReaction created 1
OpenSet created 1
InstanceEdit created 1
_AttributeValueBeforeChange created 1
ReferenceEntity created 1
Affiliation created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
Vertex created 1
ExternalOntology created 1
ReferenceDNASequence created 1
CandidateSet created 1
_Release created 1
ReferenceIsoform created 1
Polymer created 1
FragmentModification created 1
ReplacedResidue created 1
FragmentReplacedModification created 1
IntraChainCrosslinkedResidue created 1
ReferenceDatabase created 1
EntitySet created 1
ReactionCoordinates created 1
CrosslinkedResidue created 1
TranslationalModification created 1
FrontPage created 1
ReferenceGeneProduct created 1
VertexSearchableTerm created 1
URL created 1
Book created 1
PsiMod created 1
FunctionalStatus created 1
Publication created 1
Reaction created 1
GroupModifiedResidue created 1
ControlledVocabulary created 1
ReferenceGroup created 1
Complex created 1
LiteratureReference created 1
GO_CellularComponent created 1
FragmentDeletionModification created 1
DeletedControlledVocabulary created 1
PathwayDiagramItem created 1
Figure created 1
EvidenceType created 1
GO_BiologicalProcess created 1
AbstractModifiedResidue created 1
EntityWithAccessionedSequence created 1
Requirement created 1
SequenceOntology created 1
Event created 1
Regulation created 1
_InstanceBeforeChange created 1
GO_MolecularFunction created 1
CellType created 1
ReferenceSequence created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
PathwayDiagram created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
EntityVertex created 1
DatabaseObject created 1
DefinedSet created 1
Species created 1
ReferenceRNASequence created 1
Pathway created 1
Polymerisation created 1
InterChainCrosslinkedResidue created 1
PathwayVertex created 1
Summation created 1
EntityCompartment created 1
GeneticallyModifiedResidue created 1
ReferenceIsoform modified +
_Release modified +
CandidateSet modified +
ReferenceDNASequence modified +
ExternalOntology modified +
Vertex modified +
ReactionlikeEvent modified +
FragmentInsertionModification modified +
Affiliation modified +
ReferenceEntity modified +
_AttributeValueBeforeChange modified +
EntitySet modified +
ReferenceDatabase modified +
IntraChainCrosslinkedResidue modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
FragmentModification modified +
Polymer modified +
NegativeRegulation modified +
_Deleted modified +
Disease modified +
StableIdentifier modified +
BlackBoxEvent modified +
CatalystActivity modified +
SimpleEntity modified +
FunctionalStatusType modified +
ReactionVertex modified +
Edge modified +
Person modified +
Compartment modified +
InstanceEdit modified +
OpenSet modified +
FailedReaction modified +
Depolymerisation modified +
PhysicalEntity modified +
OtherEntity modified +
ConcurrentEventSet modified +
PathwayCoordinates modified +
ModifiedResidue modified +
Taxon modified +
EntityFunctionalStatus modified +
_InstanceBeforeChange modified +
Event modified +
Regulation modified +
SequenceOntology modified +
Requirement modified +
AbstractModifiedResidue modified +
EntityWithAccessionedSequence modified +
GO_BiologicalProcess modified +
EvidenceType modified +
Figure modified +
PathwayDiagramItem modified +
GeneticallyModifiedResidue modified +
EntityCompartment modified +
PathwayVertex modified +
Summation modified +
Polymerisation modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
Pathway modified +
Species modified +
DefinedSet modified +
DatabaseObject modified +
EntityVertex modified +
PathwayDiagram modified +
PositiveRegulation modified +
GenomeEncodedEntity modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
ReferenceSequence modified +
CellType modified +
GO_MolecularFunction modified +
ReferenceGroup modified +
ControlledVocabulary modified +
GroupModifiedResidue modified +
Reaction modified +
Publication modified +
FunctionalStatus modified +
URL modified +
Book modified +
PsiMod modified +
VertexSearchableTerm modified +
ReferenceGeneProduct modified +
FrontPage modified +
TranslationalModification modified +
CrosslinkedResidue modified +
ReactionCoordinates modified +
DeletedControlledVocabulary modified +
FragmentDeletionModification modified +
GO_CellularComponent modified +
LiteratureReference modified +
Complex modified +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
Requirement edited +
CandidateSet edited +
Reaction edited +
NegativeRegulation edited +
Event edited +
Regulation edited +
SimpleEntity edited +
ReactionlikeEvent edited +
Pathway edited +
FailedReaction edited +
Polymerisation edited +
OpenSet edited +
EntitySet edited +
Complex edited +
Polymer edited +
GenomeEncodedEntity edited +
OtherEntity edited +
PositiveRegulation edited +
Depolymerisation edited +
PhysicalEntity edited +
DefinedSet edited +
Event authored +
NegativeRegulation authored 1
Regulation authored 1
Reaction authored +
CandidateSet authored 1
Requirement authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
OpenSet authored 1
EntitySet authored 1
Polymerisation authored +
FailedReaction authored +
Pathway authored +
DefinedSet authored 1
Depolymerisation authored +
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
PositiveRegulation authored 1
Polymer authored 1
Complex authored 1
Complex reviewed +
Polymer reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
PositiveRegulation reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
OpenSet reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
Requirement reviewed +
CandidateSet reviewed +
Reaction reviewed +
Event reviewed +
NegativeRegulation reviewed +
Regulation reviewed +
_InstanceBeforeChange instanceEdit 1
NegativeRegulation revised +
Regulation revised +
Event revised +
Reaction revised +
CandidateSet revised +
Requirement revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
ReactionlikeEvent revised +
EntitySet revised +
OpenSet revised +
Polymerisation revised +
FailedReaction revised +
Pathway revised +
PhysicalEntity revised +
Depolymerisation revised +
DefinedSet revised +
OtherEntity revised +
PositiveRegulation revised +
GenomeEncodedEntity revised +
Polymer revised +
Complex revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.