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sel-13 [nucleoplasm]
Stable Identifier
R-CEL-6781962
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
ZNF830, Q22139
Locations in the PathwayBrowser
Expand all
DNA Repair (Caenorhabditis elegans)
Nucleotide Excision Repair (Caenorhabditis elegans)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Caenorhabditis elegans)
Dual incision in TC-NER (Caenorhabditis elegans)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Caenorhabditis elegans)
TC-NER incision complex [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Caenorhabditis elegans)
TC-NER incision complex [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Caenorhabditis elegans)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Caenorhabditis elegans)
TC-NER pre-incision complex [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Formation of TC-NER Pre-Incision Complex (Caenorhabditis elegans)
Assembly of the pre-incision complex in TC-NER (Caenorhabditis elegans)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
UVSSA:USP7 deubiquitinates ERCC6 (Caenorhabditis elegans)
TC-NER pre-incision complex [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Gap-filling DNA repair synthesis and ligation in TC-NER (Caenorhabditis elegans)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Caenorhabditis elegans)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Caenorhabditis elegans)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Metabolism of RNA (Caenorhabditis elegans)
Processing of Capped Intron-Containing Pre-mRNA (Caenorhabditis elegans)
mRNA Splicing (Caenorhabditis elegans)
mRNA Splicing - Major Pathway (Caenorhabditis elegans)
Formation of the Spliceosomal C complex containing intron lariat (Caenorhabditis elegans)
Spliceosomal B* complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal C* complex (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal P complex and exon ligation (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal P complex [nucleoplasm] (Caenorhabditis elegans)
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
sel-13 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:Q22139
Gene Names
sel-13
Reference Genes
BioGPS Gene:175617 sel-13
ENSEMBL:WBGene00011411
KEGG:cel:CELE_T04A8.10 sel-13
Monarch:175617 sel-13
NCBI Gene:175617 sel-13
UCSC:Q22139 sel-13
Wormbase:WBGene00011411
Reference Transcript
RefSeq:NM_065562.3 sel-13
Other Identifiers
175617
18527072
192954_at
A_12_P111748
CE01065
CE_WBGene00011411_A
CE_WBGene00011411_C
CGZ0033027
GO:0003676
GO:0005634
GO:0005681
GO:0006260
GO:0008270
GO:0033260
GO:0033314
GO:0043226
GO:0044773
GO:0046872
T04A8.10
T04A8.10_287-346_0.916_33_C
T04A8.10_400-459_0.949_11_B
T04A8.10_496-555_0.952_6_A
T04A8_10P00047
T04A8_10P00286
T04A8_10P00397
WBGene00011411
cea2.p.72248
Participates
as a component of
PRP19-CDC5L related complex [nucleoplasm] (Caenorhabditis elegans)
XAB2 complex [nucleoplasm] (Caenorhabditis elegans)
Inferred From
ZNF830 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_497963.1
ENSEMBL
T04A8.10.1
PRO
Q22139
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