Ncap [cytosol]

Stable Identifier
R-COV-9694300
Type
Protein [EntityWithAccessionedSequence]
Species
Severe acute respiratory syndrome coronavirus 2
Compartment
Synonyms
P0DTC9
Locations in the PathwayBrowser
General

SARS-CoV-2 mRNA2 has a length of 3,822 nt and encodes the 1,273 aa spike preprotein (Wu et al, 2020).

Literature References
PubMed ID Title Journal Year
15496142 Identification and characterization of the human ARD1-NATH protein acetyltransferase complex

Arnesen, T, Anderson, D, Baldersheim, C, Lanotte, M, Varhaug, JE, Lillehaug, JR

Biochem J 2005
12775768 Mass spectrometric characterization of proteins from the SARS virus: a preliminary report

Krokhin, O, Li, Y, Andonov, A, Feldmann, H, Flick, R, Jones, S, Stroeher, U, Bastien, N, Dasuri, KV, Cheng, K, Simonsen, JN, Perreault, H, Wilkins, J, Ens, W, Plummer, F, Standing, KG

Mol. Cell Proteomics 2003
External Reference Information
External Reference
Gene Names
N
Chain
chain:1-419
Reference Transcript
Participant Of
Other forms of this molecule
Inferred From
Modified Residues
Name
acetylated L-serine at 2
Coordinate
2
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-serine residue to either N-acetyl-L-serine, O-acetyl-L-serine, or N,O-diacetyl-L-serine.
Name
sulfur oxygenated L-methionine at 101
Coordinate
101
PsiMod Name
PsiMod Definition
A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.
Name
sulfur oxygenated L-methionine at 210
Coordinate
210
PsiMod Name
PsiMod Definition
A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.
Name
sulfur oxygenated L-methionine at 322
Coordinate
322
PsiMod Name
PsiMod Definition
A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.
Name
sulfur oxygenated L-methionine at 411
Coordinate
411
PsiMod Name
PsiMod Definition
A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.
Disease
Name Identifier Synonyms
COVID-19 0080600 2019 Novel Coronavirus (2019-nCoV), Wuhan seafood market pneumonia virus infection, 2019-nCoV infection, Wuhan coronavirus infection
Cross References
Interactors (17)
Accession #Entities Entities Confidence Score Evidence (IntAct)
 UniProt:Q9UN86 G3BP2      0.725 4
 UniProt:Q13283 G3BP1      0.725 4
 UniProt:P0DTC9 N  10 0.704 7
 UniProt:P61289 PSME3  2 0.544 3
 UniProt:Q6PKG0 LARP1      0.527 2
 UniProt:Q9HCE1 MOV10  1 0.527 2
 UniProt:Q8TAD8 SNIP1      0.527 2
 UniProt:P67870 CSNK2B  5 0.527 2
 UniProt:Q9NW13 RBM28  1 0.527 2
 UniProt:O43818 RRP9  1 0.527 2
 UniProt:Q9Y3U8 RPL36  1 0.527 2
 UniProt:P19784 CSNK2A2  2 0.527 2
 UniProt:Q13310 PABP4      0.527 2
 UniProt:Q92900 UPF1  2 0.527 2
 UniProt:Q8NCA5 FA98A      0.527 2
 UniProt:Q9NR30 DDX21  1 0.527 2
 UniProt:P11940 PABPC1  1 0.527 2
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