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Ref1 [cytosol]
Stable Identifier
R-DME-158482
Type
Protein [EntityWithAccessionedSequence]
Species
Drosophila melanogaster
Compartment
cytosol
Synonyms
ALYREF, Q9V3E7
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Drosophila melanogaster)
Processing of Capped Intron-Containing Pre-mRNA (Drosophila melanogaster)
Transport of Mature Transcript to Cytoplasm (Drosophila melanogaster)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Drosophila melanogaster)
Transport of the export-competent mRNP complex through the NPC (Drosophila melanogaster)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Drosophila melanogaster)
EJC [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
mRNP complex dissociates from cytosolic face of NPC (Drosophila melanogaster)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Drosophila melanogaster)
EJC [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
mRNA:CBC:EJC:POLDIP3 [cytosol] (Drosophila melanogaster)
EJC [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of Mature mRNAs Derived from Intronless Transcripts (Drosophila melanogaster)
Transport of Mature mRNA Derived from an Intronless Transcript (Drosophila melanogaster)
Release of the Mature intronless derived mRNA, TAP, and Aly/Ref from the NPC (Drosophila melanogaster)
Mature intronless derived mRNA:TAP:Aly/Ref complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of the Mature intronless transcript derived mRNA:TAP:Aly/Ref Complex through the NPC (Drosophila melanogaster)
Mature intronless derived mRNA:TAP:Aly/Ref complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of the SLBP Dependant Mature mRNA (Drosophila melanogaster)
Release of the Mature intronless transcript derived Histone mRNA:SLBP:eIF4E Complex (Drosophila melanogaster)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of the Mature IntronlessTranscript Derived Histone mRNA:SLBP:TAP:Aly/Ref complex through the NPC (Drosophila melanogaster)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of the SLBP independent Mature mRNA (Drosophila melanogaster)
Release of the SLBP independent Histone mRNA from the NPC (Drosophila melanogaster)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
Transport of the Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex through the NPC (Drosophila melanogaster)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex [cytosol] (Drosophila melanogaster)
Ref1 [cytosol] (Drosophila melanogaster)
External Reference Information
External Reference
UniProt:Q9V3E7
Gene Names
Ref1
Reference Genes
BioGPS Gene:44029 Ref1
CTD Gene:44029 Ref1
ENSEMBL:FBgn0010774
Flybase:FBgn0010774
KEGG Gene (Drosophila melanogaster):Dmel_CG1101 Ref1
Monarch:44029 Ref1
NCBI Gene:44029 Ref1
UCSC:Q9V3E7 Ref1
Reference Transcript
RefSeq:NM_143711.3 Ref1
Other Identifiers
154296_at
1634966_a_at
1640178_at
44029
GO:0000346
GO:0000398
GO:0003674
GO:0003676
GO:0003723
GO:0003729
GO:0005575
GO:0005622
GO:0005634
GO:0005635
GO:0005654
GO:0006397
GO:0008150
GO:0031965
GO:0032991
GO:0034641
GO:0043226
GO:0071011
GO:0071013
Participant Of
output
Release of the Mature intronless derived mRNA, TAP, and Aly/Ref from the NPC
Release of the Mature intronless transcript derived Histone mRNA:SLBP:eIF4E Complex
Release of the SLBP independent Histone mRNA from the NPC
hasComponent
EJC [cytosol]
Mature intronless derived mRNA:TAP:Aly/Ref complex [cytosol]
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [cytosol]
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex [cytosol]
Other forms of this molecule
Ref1 [nucleoplasm]
Ref1 [nucleoplasm]
Inferred From
ALYREF [cytosol] (Homo sapiens)
Cross References
RefSeq
NP_651968.1
Flybase
FBgn0010774
PRO
Q9V3E7
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9VAF3 Q9VAF3
0.488
2
UniProt:Q9VEF0
6
Odj [nucleoplasm]
(R-DME-1027348-3)
Odj [nucleoplasm]
(R-DME-2586599-3)
Odj [nucleoplasm]
(R-DME-2454144-3)
Odj [nucleoplasm]
(R-DME-2248876-3)
Odj [nucleoplasm]
(R-DME-2248870-3)
Odj [nucleoplasm]
(R-DME-2248867-3)
0.488
2
UniProt:Q24568 NETB
0.462
2
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