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yps [nucleoplasm]
Stable Identifier
R-DME-72041
Type
Protein [EntityWithAccessionedSequence]
Species
Drosophila melanogaster
Compartment
nucleoplasm
Synonyms
YBX1, Q95RE4
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Drosophila melanogaster)
Processing of Capped Intron-Containing Pre-mRNA (Drosophila melanogaster)
Formation of pre-mRNPs (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
mRNA 3'-end processing (Drosophila melanogaster)
mRNA Polyadenylation (Drosophila melanogaster)
Core CPA complex binds capped pre-mRNA (Drosophila melanogaster)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Drosophila melanogaster)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Drosophila melanogaster)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Drosophila melanogaster)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
PP1 dephosphorylates RNA Pol II (Drosophila melanogaster)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
RBBP6 activates CPSF complex (Drosophila melanogaster)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
capped, methylated pre-mRNP:CBC complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
mRNA Splicing (Drosophila melanogaster)
mRNA Splicing - Major Pathway (Drosophila melanogaster)
Formation of the Spliceosomal B* complex (Drosophila melanogaster)
Spliceosomal B* complex [nucleoplasm] (Drosophila melanogaster)
capped, methylated, polyadenylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Spliceosomal Bact complex [nucleoplasm] (Drosophila melanogaster)
capped, methylated, polyadenylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Formation of the Spliceosomal C complex containing intron lariat (Drosophila melanogaster)
Spliceosomal B* complex [nucleoplasm] (Drosophila melanogaster)
capped, methylated, polyadenylated pre-mRNP:CBC complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Spliceosomal C complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Formation of the Spliceosomal C* complex (Drosophila melanogaster)
Spliceosomal C complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Spliceosomal C* complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Formation of the Spliceosomal P complex and exon ligation (Drosophila melanogaster)
Spliceosomal C* complex [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Spliceosomal P complex [nucleoplasm] (Drosophila melanogaster)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Drosophila melanogaster)
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
mRNA Splicing - Minor Pathway (Drosophila melanogaster)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Drosophila melanogaster)
ATAC C Complex [nucleoplasm] (Drosophila melanogaster)
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Formation of AT-AC B Complex (Drosophila melanogaster)
ATAC A Complex [nucleoplasm] (Drosophila melanogaster)
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
ATAC B Complex [nucleoplasm] (Drosophila melanogaster)
ATAC A Complex [nucleoplasm] (Drosophila melanogaster)
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
Formation of AT-AC C complex (Drosophila melanogaster)
ATAC B Complex [nucleoplasm] (Drosophila melanogaster)
ATAC A Complex [nucleoplasm] (Drosophila melanogaster)
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
ATAC C Complex [nucleoplasm] (Drosophila melanogaster)
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
yps [nucleoplasm] (Drosophila melanogaster)
External Reference Information
External Reference
UniProt:Q95RE4
Gene Names
yps
Reference Genes
BioGPS Gene:39377 yps
CTD Gene:39377 yps
ENSEMBL:FBgn0022959
FlyBase:FBgn0022959
Monarch:39377 yps
NCBI Gene:39377 yps
UCSC:Q95RE4 yps
Reference Transcript
RefSeq:NM_079309.4 yps
Other Identifiers
154807_at
1633798_at
39377
GO:0000398
GO:0003676
GO:0003729
GO:0005515
GO:0005634
GO:0010468
GO:0016071
GO:0022414
GO:0048477
GO:0048856
GO:0071011
GO:0071013
GO:0071598
Participates
as a component of
U11 snRNP [nucleoplasm] (Drosophila melanogaster)
as a member of
Alternative Splicing Factors [nucleoplasm] (Drosophila melanogaster)
Other forms of this molecule
yps [cytosol]
phospho-yps [cytosol]
phospho-yps [nucleoplasm]
Inferred From
YBX1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_524033.2
ENSEMBL
FBgn0022959
,
FBtr0076027
,
FBpp0075759
FlyBase
FBgn0022959
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P28750 EXU
0.524
4
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