Reactome | col2a1 [endoplasmic reticulum lumen]

col2a1 [endoplasmic reticulum lumen]

Stable Identifier

R-DRE-2022967

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-5Hyl-COL2A1(26-1487), Q2LDA1

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q2LDA1

Gene Names

col2a1

Reference Genes

BioGPS Gene:562496 col2a1

CTD Gene:562496 col2a1

ENSEMBL:ENSDARG00000069093

ENSEMBL:ENSDARG00000069093.6 col2a1

KEGG Gene (Danio rerio):562496 col2a1

Monarch:562496 col2a1

NCBI Gene:562496 col2a1

Reference Transcript

RefSeq:NM_131292.1 col2a1

Other Identifiers

13244992

562496

A_15_P189276

A_15_P474985

A_15_P658791

CUST_3591_PI428451958

DRER13915

DRER15313

DRER58806

Dr.3761.1.S1_at

ENSDART00000074375

ENSDART00000074375_1

ENSDART00000074375_2

ENSDART00000091307

GO:0001501

GO:0005198

GO:0005201

GO:0005515

GO:0005576

GO:0005581

GO:0005615

GO:0007411

GO:0030154

GO:0030198

GO:0030199

GO:0030312

GO:0030903

GO:0031012

GO:0046872

GO:0048706

GO:0048856

GT_Xhyb_XM_005166861.1_63871

GT_Xhyb_XM_005166862.1_63861

GT_Xhyb_XM_005166863.1_63881

GT_Xhyb_XM_005166864.1_63891

LOLS01022

LOLS03965

LOLT00967

MADDr01014122

NM_131292

OTTDART00000025812

XM_682285

XM_687777

XM_691272

XM_703659

Participates

as a candidate of

4-Hyp, 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)

Other forms of this molecule

col2a1 [endoplasmic reticulum lumen]

col2a1 [extracellular region]

Inferred From

3x4Hyp-5Hyl-COL2A1(26-1487) [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,5R)-5-hydroxylysine at unknown position

PsiMod Name

(2S,5R)-5-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.

Cross References

RefSeq

NP_571367.1

ZFIN

ZDB-GENE-980526-192

Ensembl

ENSDARP00000091007, ENSDART00000100234, ENSDARG00000069093

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