Reactome | col6a2 [endoplasmic reticulum lumen]

col6a2 [endoplasmic reticulum lumen]

Stable Identifier

R-DRE-2023552

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GalHyl-COL6A2(257-1019), E7FCV8

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:E7FCV8

Gene Names

col6a2

Reference Genes

BioGPS Gene:567771 col6a2

ENSEMBL:ENSDARG00000061436

Monarch:567771 col6a2

NCBI Gene:567771 col6a2

Reference Transcript

RefSeq:XM_691072.7 col6a2

Other Identifiers

12980757

13276768

13276772

13286268

567771

A_15_P179946

A_15_P179951

A_15_P348465

CUST_1311_PI428451953

CUST_9316_PI428451958

DRER13251

DRER29785

ENSDART00000087597

ENSDART00000087597_1

ENSDART00000087597_2

ENSDART00000103187

GO:0000902

GO:0005575

GO:0005576

GO:0005615

GO:0007409

GO:0007517

GO:0008150

GO:0030154

GO:0031012

GO:0048747

GO:0048856

GO:0062023

GT_Spec_XM_691072.5_400585

MADDr01003990

XM_691072

Participant Of

input

Association of procollagen type VI

hasCandidate

3,4-Hyp 5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen]

hasComponent

Collagen type VI [endoplasmic reticulum lumen]

Other forms of this molecule

col6a2 [endoplasmic reticulum lumen]

col6a2 [extracellular region]

Inferred From

3x4Hyp-3Hyp-GalHyl-COL6A2(257-1019) [endoplasmic reticulum lumen] (Homo sapiens)

Alpha-2(VI) chains [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_696164.2

Ensembl

ENSDARP00000082031, ENSDART00000087597, ENSDARG00000061436

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