Reactome | col1a2 [endoplasmic reticulum lumen]

col1a2 [endoplasmic reticulum lumen]

Stable Identifier

R-DRE-2023674

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-GlcGalHyl-COL1A2(25-1366), Q6IQX2

Locations in the PathwayBrowser

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Extracellular matrix organization (Danio rerio)

- Collagen formation (Danio rerio)
  - Collagen biosynthesis and modifying enzymes (Danio rerio)
    - Glucosylation of collagen propeptide hydroxylysines (Danio rerio)
      - PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Danio rerio)
        
        Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        4-Hyp Glu-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        col1a2 [endoplasmic reticulum lumen] (Danio rerio)
    - PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides dissociates (Danio rerio)
      - Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        4-Hyp Glu-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        col1a2 [endoplasmic reticulum lumen] (Danio rerio)
      - PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Danio rerio)
        
        Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        4-Hyp Glu-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
        
        col1a2 [endoplasmic reticulum lumen] (Danio rerio)

External Reference Information

External Reference

UniProt:Q6IQX2

Gene Names

col1a2

Reference Genes

BioGPS Gene:336471 col1a2

ENSEMBL:ENSDARG00000020007

KEGG Gene (Danio rerio):336471 col1a2

Monarch:336471 col1a2

NCBI Gene:336471 col1a2

Reference Transcript

RefSeq:NM_182968.2 col1a2

Other Identifiers

13070509

336471

A_15_P148301

A_15_P211731

A_15_P462200

A_15_P623771

CUST_24398_PI428451953

CUST_3900_PI428451958

CUST_71_PI399344711

DRER05196

DRER43038

Dr.1377.1.A1_at

Dr.23532.1.A1_at

Dr.5521.1.S1_at

ENSDART00000042990

ENSDART00000042990_1

ENSDART00000042990_2

GO:0001501

GO:0003674

GO:0005198

GO:0005201

GO:0005575

GO:0005576

GO:0005581

GO:0005584

GO:0005615

GO:0008150

GO:0009612

GO:0030198

GO:0031012

GO:0032991

GO:0048856

GT_Xhyb_NM_182968.2_221065

GT_Xhyb_XM_005159710.1_416835

GT_Xhyb_XM_005159711.1_416845

GT_Xhyb_XM_005159712.1_416825

GT_Xhyb_XM_005159713.1_416815

LOLS01016

LOLS04377

MADDr01007670

NM_182968

OTTDART00000018696

Participant Of

hasCandidate

4-Hyp Glu-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen]

Other forms of this molecule

col1a2 [endoplasmic reticulum lumen]

col1a2 [extracellular region]

Inferred From

3x4Hyp-GlcGalHyl-COL1A2(25-1366) [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

O5-glucosylgalactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-glucosylgalactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-glucosylgalactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_892013.2

Ensembl

ENSDARG00000020007, ENSDARP00000118091, ENSDART00000144544

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