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5Hyl-COL8A1(28-?) [extracellular region]
Stable Identifier
R-DRE-2470350
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
X1WGI4
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Degradation of the extracellular matrix (Danio rerio)
Collagen degradation (Danio rerio)
Collagen type VIII degradation by MMP1 (Danio rerio)
Cleaved collagen type VIII fibril [extracellular region] (Danio rerio)
Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)
Cleaved collagen alpha-1(VIII) chains [extracellular region] (Danio rerio)
5Hyl-COL8A1(28-?) [extracellular region] (Danio rerio)
Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Danio rerio)
Cleaved collagen fibrils [extracellular region] (Danio rerio)
Cleaved collagen type VIII fibril [extracellular region] (Danio rerio)
Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)
Cleaved collagen alpha-1(VIII) chains [extracellular region] (Danio rerio)
5Hyl-COL8A1(28-?) [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:X1WGI4
Reference Genes
BioGPS Gene:562442
CTD Gene:562442
dbSNP Gene:562442
ENSEMBL:ENSDARG00000003533
KEGG Gene (Danio rerio):562442
Monarch:562442
NCBI Gene:562442
Reference Transcript
RefSeq:XM_005161783.3
RefSeq:XM_685822.8
Other Identifiers
13123601
562442
A_15_P139096
col8a1b
col8a1b-202
col8a1b-203
CR956626
DRER02492
DRER52652
ENSDARG00000003533
ENSDARP00000129340
ENSDARP00000156329
ENSDART00000019846
ENSDART00000019846_1
ENSDART00000019846_2
ENSDART00000154717
ENSDART00000182377
EntrezGene:562442
EntrezGene:col8a1b
FO681387
GO:0003674
GO:0005198
GO:0005201
GO:0005515
GO:0005575
GO:0005576
GO:0005581
GO:0005615
GO:0008150
GO:0030198
GO:0031012
GO:0032991
IPR001073
IPR008160
IPR008983
MADDr01000155
OTTDART00000021947
PF00386
PF01391
PR00007
Q1L863
SM00110
UPI0001760C52
XM_005161783
XM_685822
XP_005161840
XP_690914
ZDB-GENE-060503-140
Participant Of
hasMember
Cleaved collagen alpha-1(VIII) chains [extracellular region]
Other forms of this molecule
3x4Hyp-3Hyp-GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL8A1(28-?) [extracellular region]
GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-5Hyl-COL8A1(?-744) [extracellular region]
GalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(28-744) [extracellular region]
COL8A1(28-744) [extracellular region]
5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-COL8A1(28-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-GalHyl-COL8A1(28-744) [extracellular region]
GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(28-?) [extracellular region]
GlcGalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-?) [extracellular region]
COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(?-744) [extracellular region]
3x4Hyp-COL8A1(28-?) [extracellular region]
3x4Hyp-GalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(?-744) [extracellular region]
GlcGalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-5Hyl-COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(28-?) [extracellular region]
COL8A1(?-744) [extracellular region]
5Hyl-COL8A1(?-744) [extracellular region]
GalHyl-COL8A1(28-?) [extracellular region]
Inferred From
5Hyl-COL8A1(28-?) [extracellular region] (Homo sapiens)
Modified Residues
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
XP_005161840.1
,
XP_690914.3
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