Reactome | wu:fc60b11 [nucleoplasm]

wu:fc60b11 [nucleoplasm]

Stable Identifier

R-DRE-54257

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

nucleoplasm

Synonyms

ELL, Q6PEG4

Locations in the PathwayBrowser

Expand all

Gene expression (Transcription) (Danio rerio)

- RNA Polymerase II Transcription (Danio rerio)
  - Generic Transcription Pathway (Danio rerio)
    - Transcriptional Regulation by TP53 (Danio rerio)
      - TP53 Regulates Transcription of DNA Repair Genes (Danio rerio)
        
        CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Danio rerio)
        
        CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Danio rerio)
        
        CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)
        
        CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
        
        Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)
  - RNA polymerase II transcribes snRNA genes (Danio rerio)
    - Integrator complex processes the 3' end of snRNA (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Danio rerio)
        
        LEC [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Danio rerio)
        
        LEC [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)
    - Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Danio rerio)
        
        LEC [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)
      - RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Danio rerio)
        
        LEC [nucleoplasm] (Danio rerio)
        
        wu:fc60b11 [nucleoplasm] (Danio rerio)

External Reference Information

External Reference

UniProt:Q6PEG4

Gene Names

wu:fc60b11

Reference Genes

BioGPS Gene:325221 wu:fc60b11

ENSEMBL:ENSDARG00000000568

ENSEMBL:ENSDARG00000000568.9 wu:fc60b11

KEGG Gene (Danio rerio):325221 wu:fc60b11

Monarch:325221 wu:fc60b11

NCBI Gene:325221 wu:fc60b11

Reference Transcript

RefSeq:NM_199707.1 wu:fc60b11

Other Identifiers

13128293

325221

A_15_P102806

A_15_P110380

A_15_P221736

A_15_P364880

A_15_P632436

A_15_P636872

A_15_P674836

CJ004003

CUST_12750_PI428451958

CUST_18156_PI428451953

DRER04059

DRER15440

Dr.15700.1.A1_at

ENSDART00000032770

ENSDART00000032770_1

ENSDART00000032770_2

ENSDART00000100642

ENSDART00000100642_y_1

GO:0000987

GO:0001570

GO:0003677

GO:0003746

GO:0005634

GO:0005654

GO:0006351

GO:0006355

GO:0006366

GO:0006368

GO:0006414

GO:0008023

GO:0016073

GO:0030154

GO:0032968

GO:0042795

GO:0043226

GO:0045182

GO:0048856

GT_Spec_NM_199707.1_332925

JP004402

LOLS06663

MADDr01007230

NM_199707

OTTDART00000016898

XM_696993

Participates

as a component of

Inferred From

ELL,ELL2,ELL3 [nucleoplasm] (Homo sapiens)

ELL [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

NP_956001.1

ZFIN

ZDB-GENE-030131-3946

Ensembl

ENSDARG00000000568, ENSDARP00000091415, ENSDART00000100642