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wu:fb83e08 [nucleoplasm]
Stable Identifier
R-DRE-65545
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
TAF6, Q66HZ5
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
RNA polymerase II transcribes snRNA genes (Danio rerio)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Danio rerio)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
Integrator complex processes the 3' end of snRNA (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
wu:fb83e08 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q66HZ5
Gene Names
wu:fb83e08
Reference Genes
BioGPS Gene:447818 wu:fb83e08
ENSEMBL:ENSDARG00000102998
ENSEMBL:ENSDARG00000102998.3 wu:fb83e08
KEGG Gene (Danio rerio):447818 wu:fb83e08
Monarch:447818 wu:fb83e08
NCBI Gene:447818 wu:fb83e08
Reference Transcript
RefSeq:XM_009301821.2 wu:fb83e08
RefSeq:XM_021476094.1 wu:fb83e08
RefSeq:NM_001004557.1 wu:fb83e08
Other Identifiers
13208966
447818
A_15_P176536
A_15_P623961
BC081612.1
CJ005408
CJ005409
CUST_2507_PI428451958
CUST_28716_PI428451953
CUST_953_PI424165564
CUST_954_PI424165564
CUST_955_PI424165564
CUST_957_PI424165564
CUST_959_PI424165564
DRER05185
DRER42360
Dr.2070.1.A1_at
ENSDART00000042901_1
ENSDART00000042901_2
GO:0000124
GO:0003713
GO:0005634
GO:0005654
GO:0005669
GO:0005694
GO:0006351
GO:0006355
GO:0006367
GO:0016251
GO:0043226
GO:0045893
GO:0046695
GO:0046982
GO:0051123
GO:0065003
GO:0140110
GO:0140223
GT_Spec_NM_001004557.1_238605
JP005807
JP005808
LOLS14723
MADDr01014647
NM_001004557
OTTDART00000022644
XM_686412
ZV700S00003409
Participates
as a component of
snTAFc [nucleoplasm] (Danio rerio)
Inferred From
TAF6 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_009300096.1
,
XP_021331769.1
,
NP_001004557.1
ZFIN
ZDB-GENE-040912-23
Ensembl
ENSDART00000161751
,
ENSDARP00000134854
,
ENSDARG00000102998
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