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chunp6933 [cytosol]
Stable Identifier
R-DRE-72379
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPS5, Q6PC80
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
eIF3 and eIF1A bind to the 40S subunit (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
40S:eIF3:eIF1A [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
Formation of the ternary complex, and subsequently, the 43S complex (Danio rerio)
Formation of the 43S pre-initiation complex (Danio rerio)
40S:eIF3:eIF1A [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
Ribosomal scanning and start codon recognition (Danio rerio)
Ribosomal scanning (Danio rerio)
48S complex [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
Start codon recognition (Danio rerio)
48S complex [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Association of phospho-L13a with GAIT element of Ceruloplasmin mRNA (Danio rerio)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
phospho-L13a associated wth the 3' UTR GAIT element of ceruloplasmin mRNA within the translation initiation complex [cytosol] (Danio rerio)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
chunp6933 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6PC80
Gene Names
chunp6933
Reference Genes
ENSEMBL:ENSDARG00000043453
ENSEMBL:ENSDARG00000043453.7 chunp6933
Reference Transcript
RefSeq:XM_021481330.1 chunp6933
Other Identifiers
13027804
192297
A_15_P103316
A_15_P105116
A_15_P109726
A_15_P402665
A_15_P669851
CUST_10286_PI428451953
DRER08883
DRER44394
Dr.1324.1.S1_at
ENSDART00000063789
ENSDART00000063789_1
ENSDART00000063789_2
ENSDART00000112355
GO:0000028
GO:0003723
GO:0003729
GO:0003735
GO:0005198
GO:0005829
GO:0005840
GO:0006412
GO:0015935
GO:0019843
GO:0022627
GO:0042254
GO:0043226
GO:0065003
GO:1990904
GT_Spec_NM_173232.1_212355
LOLS03466
MADDr01006860
NM_173232
OTTDART00000026055
OTTDART00000026056
Participates
as a component of
40S ribosomal complex [cytosol] (Danio rerio)
Other forms of this molecule
chunp6933 [nucleoplasm]
Inferred From
RPS5 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_021337005.1
ZFIN
ZDB-GENE-020419-12
Ensembl
ENSDART00000146054
,
ENSDARP00000123493
,
ENSDARP00000063788
,
ENSDART00000063789
,
ENSDARG00000043453
PDB
7OYA
,
7OYB
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