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wu:fb13h07 [cytosol]
Stable Identifier
R-DRE-72426
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPL21, Q6IQQ0
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Dissociation of L13a from the 60s ribosomal subunit (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fb13h07 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6IQQ0
Gene Names
wu:fb13h07
Reference Genes
BioGPS Gene:336568 wu:fb13h07
ENSEMBL:ENSDARG00000010516
ENSEMBL:ENSDARG00000010516.8 wu:fb13h07
ENSEMBL:ENSDARG00000110263.1 wu:fb13h07
KEGG Gene (Danio rerio):336568 wu:fb13h07
Monarch:336568 wu:fb13h07
NCBI Gene:336568 wu:fb13h07
Reference Transcript
RefSeq:NM_001002155.1 wu:fb13h07
Other Identifiers
13145474
336568
A_15_P112517
DRER00142
Dr.643.1.S1_at
ENSDART00000002595
ENSDART00000002595_1
ENSDART00000002595_2
GO:0003735
GO:0005198
GO:0005829
GO:0005840
GO:0006412
GO:0022625
GO:0043226
GT_Spec_NM_001002155.1_216145
LOLS15251
MADDr01007678
NM_001002155
OTTDART00000027134
XM_684524
XM_704231
Participates
as a component of
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
Inferred From
RPL21 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001002155.1
ZFIN
ZDB-GENE-030131-8512
Ensembl
ENSDARG00000110263
,
ENSDART00000002595
,
ENSDART00000183611
,
ENSDART00000178274
,
ENSDARP00000016158
,
ENSDARG00000010516
,
ENSDARP00000149221
,
ENSDARP00000144531
PDB
7OYB
,
7OYA
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