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zgc:136896 [cytosol]
Stable Identifier
R-DRE-72454
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPL31, Q24JV3
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Dissociation of L13a from the 60s ribosomal subunit (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
zgc:136896 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q24JV3
Gene Names
zgc:136896
Reference Genes
BioGPS Gene:677758 zgc:136896
ENSEMBL:ENSDARG00000053365
ENSEMBL:ENSDARG00000053365.7 zgc:136896
KEGG Gene (Danio rerio):677758 zgc:136896
Monarch:677758 zgc:136896
NCBI Gene:677758 zgc:136896
Reference Transcript
RefSeq:NM_001040052.2 zgc:136896
RefSeq:XM_005169139.3 zgc:136896
Other Identifiers
13270540
677758
A_15_P113890
A_15_P207736
A_15_P418505
CUST_27552_PI428451953
CUST_4273_PI428451958
DRER10347
DRER46802
DRER47083
DRER47623
DRER47841
DRER47899
Dr.25737.2.S1_at
ENSDART00000075402
ENSDART00000075402_1
ENSDART00000075402_2
GO:0002181
GO:0003735
GO:0005198
GO:0005829
GO:0005840
GO:0006412
GO:0022625
GO:0043226
GO:1990904
GT_Spec_NM_001040052.2_410605
GT_Xhyb_XM_005169140.1_372255
LOLS04757
MADDr01003328
ZV700S00004596
Participates
as a component of
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
Inferred From
RPL31 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001035141.1
,
XP_005169196.1
ZFIN
ZDB-GENE-060331-121
Ensembl
ENSDARP00000124804
,
ENSDART00000149851
,
ENSDARG00000053365
,
ENSDART00000149554
,
ENSDARP00000123730
PDB
7OYA
,
7OYB
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