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si:dz180g5.3 [nucleoplasm]
Stable Identifier
R-DRE-73683
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
UBTF, F1QZ83
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase I Transcription (Danio rerio)
RNA Polymerase I Promoter Clearance (Danio rerio)
RNA Polymerase I Promoter Opening (Danio rerio)
Phosphorylation of UBF-1:rDNA Promoter (Danio rerio)
UBF-1:rDNA Promoter [nucleoplasm] (Danio rerio)
si:dz180g5.3 [nucleoplasm] (Danio rerio)
UBF-1 Binds rDNA Promoter (Danio rerio)
UBF-1:rDNA Promoter [nucleoplasm] (Danio rerio)
si:dz180g5.3 [nucleoplasm] (Danio rerio)
si:dz180g5.3 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:F1QZ83
Gene Names
si:dz180g5.3
Reference Genes
BioGPS Gene:368509 si:dz180g5.3
ENSEMBL:ENSDARG00000035066
ENSEMBL:ENSDARG00000035066.9 si:dz180g5.3
KEGG Gene (Danio rerio):368509 si:dz180g5.3
Monarch:368509 si:dz180g5.3
NCBI Gene:368509 si:dz180g5.3
Reference Transcript
RefSeq:XM_009299333.3 si:dz180g5.3
RefSeq:XM_005163867.4 si:dz180g5.3
RefSeq:XM_009299332.2 si:dz180g5.3
RefSeq:NM_001005395.1 si:dz180g5.3
Other Identifiers
13173892
368509
A_15_P104997
A_15_P631886
A_15_P649746
A_15_P663036
CJ005706
CJ005707
CJ005709
CJ005710
CJ005712
CJ005713
CUST_16824_PI428451953
CUST_4097_PI424165564
CUST_4098_PI424165564
CUST_4099_PI424165564
CUST_4100_PI424165564
CUST_4101_PI424165564
CUST_4102_PI424165564
CUST_4103_PI424165564
CUST_4104_PI424165564
CUST_6033_PI424165604
CUST_6034_PI424165604
CUST_6035_PI424165604
CUST_6036_PI424165604
CUST_6037_PI424165604
CUST_6038_PI424165604
CUST_6039_PI424165604
CUST_6040_PI424165604
CUST_6540_PI428451958
DRER07336
DRER27758
Dr.6451.1.A1_at
ENSDART00000048725_1
ENSDART00000048725_2
ENSDART00000056614
ENSDART00000104102
GO:0001164
GO:0001181
GO:0001188
GO:0003677
GO:0005634
GO:0006351
GO:0006355
GO:0006360
GO:0043226
GO:0045943
GO:0065003
GO:0140223
GT_Xhyb_NM_001005395.1_40311
GT_Xhyb_XM_005163867.1_58971
GT_Xhyb_XM_005163868.1_208305
JP006105
JP006106
JP006108
JP006109
JP006111
JP006112
LOLS16322
MADDr01014540
OTTDART00000001988
OTTDART00000001989
OTTDART00000024329
OTTDART00000024330
XM_680196
XM_704722
XM_704723
XM_704724
XM_704726
XM_704729
Participates
as an input of
UBF-1 Binds rDNA Promoter (Danio rerio)
as a component of
UBF-1:rDNA Promoter [nucleoplasm] (Danio rerio)
Other forms of this molecule
phospho-si:dz180g5.3 [nucleoplasm]
Inferred From
UBTF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_009297607.1
,
XP_005163924.1
,
NP_001005395.1
,
XP_009297608.1
ZFIN
ZDB-GENE-030616-252
Ensembl
ENSDARP00000056613
,
ENSDARP00000131061
,
ENSDART00000165695
,
ENSDART00000056614
,
ENSDARG00000035066
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