Reactome | zgc:55475 [nucleoplasm]

zgc:55475 [nucleoplasm]

Stable Identifier

R-DRE-83726

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

nucleoplasm

Synonyms

SNAPC1, Q7ZUP7

Locations in the PathwayBrowser

Expand all

Gene expression (Transcription) (Danio rerio)

- RNA Polymerase II Transcription (Danio rerio)
  - RNA polymerase II transcribes snRNA genes (Danio rerio)
    - CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Danio rerio)
      - RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
      - RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
    - General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Danio rerio)
      - Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
      - SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
    - Integrator complex processes the 3' end of snRNA (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
    - Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)
      - RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
        
        Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc:POU2F1,2:SP1:ZNF143:snRNA gene [nucleoplasm] (Danio rerio)
        
        SNAPc [nucleoplasm] (Danio rerio)
        
        zgc:55475 [nucleoplasm] (Danio rerio)

External Reference Information

External Reference

UniProt:Q7ZUP7

Gene Names

zgc:55475

Reference Genes

BioGPS Gene:393224 zgc:55475

CTD Gene:393224 zgc:55475

ENSEMBL:ENSDARG00000003827

ENSEMBL:ENSDARG00000003827.7 zgc:55475

KEGG Gene (Danio rerio):393224 zgc:55475

Monarch:393224 zgc:55475

NCBI Gene:393224 zgc:55475

Reference Transcript

RefSeq:NM_200254.1 zgc:55475

Other Identifiers

13005368

13277074

13277084

393224

A_15_P106287

A_15_P197806

A_15_P495137

A_15_P723911

BC048040.1

DRER00321

DRER33765

DRER34811

Dr.9637.1.S1_at

ENSDART00000003888

ENSDART00000003888_1

ENSDART00000003888_2

GO:0003677

GO:0006351

GO:0016073

GO:0019185

GO:0042795

GO:0042796

GO:0043565

LOLS07396

LOLS07462

MADDr01009054

NM_200254

OTTDART00000029737

Participates

as a component of

SNAPc [nucleoplasm] (Danio rerio)

Inferred From

SNAPC1 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

NP_956548.1

ZFIN

ZDB-GENE-040426-716

Ensembl

ENSDARP00000023186, ENSDART00000003888, ENSDARG00000003827

PRO

Q7ZUP7