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HMGB1 [extracellular region]
Stable Identifier
R-DRE-879382
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
HMGB1, Q6NX86
Locations in the PathwayBrowser
Expand all
Immune System (Danio rerio)
Cytokine Signaling in Immune system (Danio rerio)
Signaling by Interleukins (Danio rerio)
Interleukin-1 family signaling (Danio rerio)
Interleukin-1 signaling (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Innate Immune System (Danio rerio)
Advanced glycosylation endproduct receptor signaling (Danio rerio)
Advanced glycosylation end product-specific receptor (AGER/RAGE) is a multiligand receptor (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
DDX58/IFIH1-mediated induction of interferon-alpha/beta (Danio rerio)
TRAF6 mediated NF-kB activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Neutrophil degranulation (Danio rerio)
Exocytosis of ficolin-rich granule lumen proteins (Danio rerio)
Ficolin-rich granule lumen proteins [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Exocytosis of secretory granule lumen proteins (Danio rerio)
Secretory granule lumen proteins [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll-like Receptor Cascades (Danio rerio)
Toll Like Receptor 10 (TLR10) Cascade (Danio rerio)
MyD88 cascade initiated on plasma membrane (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 2 (TLR2) Cascade (Danio rerio)
Toll Like Receptor TLR1:TLR2 Cascade (Danio rerio)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor TLR6:TLR2 Cascade (Danio rerio)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 3 (TLR3) Cascade (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 4 (TLR4) Cascade (Danio rerio)
MyD88-independent TLR4 cascade (Danio rerio)
TRIF(TICAM1)-mediated TLR4 signaling (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 5 (TLR5) Cascade (Danio rerio)
MyD88 cascade initiated on plasma membrane (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 7/8 (TLR7/8) Cascade (Danio rerio)
MyD88 dependent cascade initiated on endosome (Danio rerio)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
Toll Like Receptor 9 (TLR9) Cascade (Danio rerio)
MyD88 dependent cascade initiated on endosome (Danio rerio)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation (Danio rerio)
TAK1-dependent IKK and NF-kappa-B activation (Danio rerio)
NF-kappa-B complex is transported from cytosol to nucleus (Danio rerio)
AGER ligands:AGER [plasma membrane] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
HMGB1 [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6NX86
Gene Names
HMGB1
Reference Genes
BioGPS Gene:321622 HMGB1
CTD Gene:321622 HMGB1
ENSEMBL:ENSDARG00000099175
ENSEMBL:ENSDARG00000099175.3 HMGB1
ENSEMBL:ENSDARG00000114353.1 HMGB1
KEGG Gene (Danio rerio):110438871 HMGB1
KEGG Gene (Danio rerio):321622 HMGB1
Monarch:321622 HMGB1
NCBI Gene:321622 HMGB1
Reference Transcript
RefSeq:XM_021472359.1 HMGB1
RefSeq:NM_199555.2 HMGB1
Other Identifiers
110438871
12970140
321622
A_15_P110467
A_15_P532107
A_15_P745357
BC045917
BC067193
CJ001488
CUST_4009_PI424165973
CUST_4010_PI424165973
CUST_4011_PI424165973
CUST_4012_PI424165973
CUST_4013_PI424165973
CUST_4014_PI424165973
CUST_4015_PI424165973
CUST_4016_PI424165973
CUST_9753_PI424165604
CUST_9754_PI424165604
CUST_9755_PI424165604
CUST_9756_PI424165604
CUST_9757_PI424165604
CUST_9758_PI424165604
CUST_9759_PI424165604
CUST_9760_PI424165604
DRER19417
Dr.1067.1.S1_at
ENSDART00000111964
GO:0003677
GO:0005634
GO:0005694
GO:0005886
GO:0006351
GO:0006355
GO:0006357
GO:0008301
GO:0009409
GO:0030154
GO:0030900
GO:0031099
GO:0031103
GO:0043226
GO:0048856
GT_Spec_NM_199555.2_42971
JP001488
LOLS03108
NM_199555
Participates
as a member of
Secretory granule lumen proteins [extracellular region] (Danio rerio)
Ficolin-rich granule lumen proteins [extracellular region] (Danio rerio)
AGER ligands [extracellular region] (Danio rerio)
Other forms of this molecule
HMGB1 [secretory granule lumen]
HMGB1 [ficolin-1-rich granule lumen]
HMGB1 [nucleoplasm]
HMGB1 [extracellular region]
Inferred From
HMGB1 [extracellular region]
(Homo sapiens)
Cross References
RefSeq
XP_021328034.1
,
NP_955849.2
OpenTargets
ENSG00000189403
ZFIN
ZDB-GENE-030131-341
Ensembl
ENSDARP00000134229
,
ENSDARG00000099175
,
ENSDARP00000149008
,
ENSDARP00000153427
,
ENSDART00000165386
,
ENSDARG00000114353
,
ENSDART00000187146
,
ENSDART00000193786
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