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smg5 [cytosol]
Stable Identifier
R-DRE-927867
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
SMG5, F1R7R1
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
smg5 [cytosol] (Danio rerio)
mRNA Cleaved by SMG6 [cytosol] (Danio rerio)
smg5 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
smg5 [cytosol] (Danio rerio)
smg5 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:F1R7R1
Gene Names
smg5
Reference Genes
BioGPS Gene:553261 smg5
ENSEMBL:ENSDARG00000041481
KEGG Gene (Danio rerio):553261 smg5
Monarch:553261 smg5
NCBI Gene:553261 smg5
Reference Transcript
RefSeq:NM_001024923.1 smg5
Other Identifiers
13034548
553261
A_15_P208641
CUST_23637_PI428451953
CUST_2527_PI428451958
DRER08242
ENSDART00000060809
ENSDART00000060809_1
ENSDART00000060809_2
GO:0000184
GO:0003677
GO:0003723
GO:0005515
GO:0005634
GO:0005697
GO:0005737
GO:0016071
GO:0042162
GO:0043009
GO:0043226
GO:0048856
GO:0070034
GT_Spec_NM_001024923.1_1231
MADDr01002698
NM_001024923
XM_682536
Participates
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Inferred From
SMG5 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001020094.1
ZFIN
ZDB-GENE-050913-144
Ensembl
ENSDART00000060809
,
ENSDARP00000060808
,
ENSDARG00000041481
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