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TCEA1 [nucleoplasm]
Stable Identifier
R-GGA-65748
Type
Protein [EntityWithAccessionedSequence]
Species
Gallus gallus
Compartment
nucleoplasm
Synonyms
Q5ZHQ8
Locations in the PathwayBrowser
Expand all
DNA Repair (Gallus gallus)
Nucleotide Excision Repair (Gallus gallus)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Gallus gallus)
Dual incision in TC-NER (Gallus gallus)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Gallus gallus)
TC-NER incision complex [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Gallus gallus)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Gallus gallus)
TC-NER pre-incision complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
ERCC5 and RPA bind TC-NER site (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Formation of TC-NER Pre-Incision Complex (Gallus gallus)
UVSSA:USP7 deubiquitinates ERCC6 (Gallus gallus)
TC-NER pre-incision complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Gap-filling DNA repair synthesis and ligation in TC-NER (Gallus gallus)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Gallus gallus)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Gallus gallus)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Gene expression (Transcription) (Gallus gallus)
RNA Polymerase II Transcription (Gallus gallus)
Generic Transcription Pathway (Gallus gallus)
Transcriptional Regulation by TP53 (Gallus gallus)
TP53 Regulates Transcription of DNA Repair Genes (Gallus gallus)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Gallus gallus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Gallus gallus)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Gallus gallus)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
RNA Polymerase II Pre-transcription Events (Gallus gallus)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Gallus gallus)
Paused processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Abortive termination of elongation after arrest (Gallus gallus)
Aborted elongation complex after arrest [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Resumption of elongation after recovery from pausing (Gallus gallus)
Paused processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
TFIIS-mediated recovery of elongation from arrest (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
RNA Polymerase II Transcription Elongation (Gallus gallus)
Addition of nucleotides leads to transcript elongation (Gallus gallus)
Elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Pol II elongation complex moves on the template as transcript elongates (Gallus gallus)
Elongation complex prior to separation [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Separation of elongating transcript from template (Gallus gallus)
Elongation complex prior to separation [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Gallus gallus)
TCEA1 [nucleoplasm] (Gallus gallus)
External Reference Information
External Reference
UniProt:Q5ZHQ8
Reference Genes
BioGPS Gene:421119
ENSEMBL:ENSGALG00000015274
KEGG Gene (Gallus gallus):421119
Monarch:421119
NCBI Gene:421119
Reference Transcript
RefSeq:NM_001006387.1
Participates
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Gallus gallus)
Paused processive elongation complex [nucleoplasm] (Gallus gallus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Gallus gallus)
Elongation complex prior to separation [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
Elongation complex [nucleoplasm] (Gallus gallus)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Gallus gallus)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Gallus gallus)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Gallus gallus)
TC-NER pre-incision complex [nucleoplasm] (Gallus gallus)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Inferred From
TCEA1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001006387.1
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