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SNRPD2 [cytosol]
Stable Identifier
R-HSA-191810
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Sm protein D2, SMD2_HUMAN, Small nuclear ribonucleoprotein Sm D2, snRNP core protein D2, Sm-D2
Locations in the PathwayBrowser for interactor UniProt:Q8NHQ1
Expand all
Metabolism of RNA (Homo sapiens)
Metabolism of non-coding RNA (Homo sapiens)
snRNP Assembly (Homo sapiens)
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
SNRPD2 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:P62316 SNRPD2
Gene Names
SNRPD2, SNRPD1
Chain
initiator methionine:, chain:2-118
Reference Genes
BioGPS Gene:6633 SNRPD2
COSMIC (genes):SNRPD2 SNRPD2
CTD Gene:6633 SNRPD2
dbSNP Gene:6633 SNRPD2
ENSEMBL:ENSG00000125743 SNRPD1
ENSEMBL_homo_sapiens_GENE:ENSG00000125743.11 SNRPD2
HGNC:11159 SNRPD2
KEGG Gene (Homo sapiens):6633 SNRPD2
Monarch:6633 SNRPD2
NCBI Gene:6633 SNRPD2
OMIM:601061 SNRPD2
UCSC:P62316 SNRPD2
Reference Transcript
RefSeq:NM_004597.6 SNRPD2
RefSeq:NM_177542.3 SNRPD2
Other Identifiers
11757666_x_at
16873391
200826_PM_at
200826_at
35270_at
3865569
3865570
3865571
3865572
3865575
3865576
3865577
3865578
3865579
3865580
3865581
3865582
3865583
6633
8037642
A_24_P74160
GE58956
GO:0000245
GO:0000387
GO:0000398
GO:0003723
GO:0005515
GO:0005576
GO:0005615
GO:0005634
GO:0005654
GO:0005681
GO:0005682
GO:0005685
GO:0005686
GO:0005687
GO:0005689
GO:0005737
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0030532
GO:0034709
GO:0034715
GO:0034719
GO:0036261
GO:0043226
GO:0046540
GO:0065003
GO:0070062
GO:0071005
GO:0071007
GO:0071011
GO:0071013
GO:1903241
GO:1990904
HMNXSV003005449
ILMN_1771060
ILMN_2369785
PH_hs_0019804
PH_hs_0033284
TC19001628.hg
U15008_at
g7242206_3p_at
Participates
as an input of
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
as a component of
snRNP Sm core complex [cytosol] (Homo sapiens)
Other forms of this molecule
SNRPD2 [nucleoplasm]
Inferred To
snrpd2 [cytosol]
(Dictyostelium discoideum)
snrpd2 [cytosol]
(Xenopus tropicalis)
Snrpd2 [cytosol]
(Mus musculus)
Snrpd2 [cytosol]
(Rattus norvegicus)
smd2 [cytosol]
(Schizosaccharomyces pombe)
im:6908977 [cytosol]
(Danio rerio)
snr-4 [cytosol]
(Caenorhabditis elegans)
SmD2 [cytosol]
(Drosophila melanogaster)
SMD2 [cytosol]
(Saccharomyces cerevisiae)
SNRPD2 [cytosol]
(Bos taurus)
SNRPD2 [cytosol]
(Canis familiaris)
SNRPD2 [cytosol]
(Gallus gallus)
SNRPD2 [cytosol]
(Plasmodium falciparum)
SNRPD2 [cytosol]
(Sus scrofa)
Cross References
RefSeq
NP_808210.2
,
NP_004588.1
OpenTargets
ENSG00000125743
GeneCards
P62316
HPA
ENSG00000125743-SNRPD2
Ensembl
ENST00000588301
,
ENSP00000465216
,
ENSP00000466152
,
ENST00000391932
,
ENST00000587367
,
ENST00000588599
,
ENSP00000342374
,
ENSP00000465952
,
ENSP00000375798
,
ENST00000342669
,
ENSG00000125743
PRO
P62316
Pharos - Targets
P62316
PDB
6Y5Q
,
7W59
,
5XJC
,
4WZJ
,
6AH0
,
3PGW
,
4PJO
,
5MQF
,
7B0Y
,
5XJL
,
7W5A
,
6FF7
,
6Y53
,
7QTT
,
7A5P
,
1B34
,
5XJQ
,
6QX9
,
7ABI
,
7VPX
,
6QDV
,
5Z57
,
6QW6
,
5XJR
,
5YZG
,
5Z56
,
6AHD
,
7W5B
,
5XJT
,
8C6J
,
5XJS
,
8HK1
,
7ABG
,
6ID1
,
4V98
,
5Z58
,
4F7U
,
7EVO
,
8CH6
,
3CW1
,
3JCR
,
5O9Z
,
7DVQ
,
5XJU
,
6ID0
,
6ICZ
Interactors (19)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P54105 CLNS1A
1
CLNS1A [cytosol]
(R-HSA-191796)
0.844
11
UniProt:P62306 SNRPF
2
SNRPF [nucleoplasm]
(R-HSA-71907)
SNRPF [cytosol]
(R-HSA-191852)
0.801
11
UniProt:Q9Y333 LSM2
2
LSM2 [nucleoplasm]
(R-HSA-71894)
LSM2 [cytosol]
(R-HSA-429849)
0.668
3
UniProt:P62312 LSM6
2
LSM6 [nucleoplasm]
(R-HSA-6806794)
LSM6 [cytosol]
(R-HSA-429936)
0.667
3
UniProt:P14678 SNRPB
4
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [nucleoplasm]
(R-HSA-71896)
SNRPB [cytosol]
(R-HSA-191798)
2xMe-SNRPB [cytosol]
(R-HSA-192218)
0.656
3
UniProt:Q16637 SMN1
2
SMN1 [nucleoplasm]
(R-HSA-191892)
SMN1 [cytosol]
(R-HSA-191839)
0.643
3
UniProt:O14893 GEMIN2
2
GEMIN2 [nucleoplasm]
(R-HSA-191795)
GEMIN2 [cytosol]
(R-HSA-191835)
0.623
4
UniProt:P62314 SNRPD1
3
2xMe-SNRPD1 [nucleoplasm]
(R-HSA-192215)
SNRPD1 [cytosol]
(R-HSA-191890)
2xMe-SNRPD1 [cytosol]
(R-HSA-192217)
0.573
3
UniProt:P62304 SNRPE
2
SNRPE [nucleoplasm]
(R-HSA-71905)
SNRPE [cytosol]
(R-HSA-191782)
0.564
2
UniProt:Q8NHQ1 CEP70
1
CEP70 [cytosol]
(R-HSA-380257)
0.556
3
UniProt:Q9BW66 CINP
0.556
3
UniProt:P54253 ATX1
0.556
3
UniProt:Q5MJ10 SPXN2
0.556
3
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.556
3
UniProt:P08621 SNRNP70
1
SNRNP70 [nucleoplasm]
(R-HSA-71913)
0.527
3
UniProt:P10636-8 MAPT
3
p-S199,S202,S262,S396,S404,S409,T181,T231-MAPT-8 [cytosol]
(R-HSA-9836400)
p-S262,S356,S396-MAPT-8 [cytosol]
(R-HSA-9619521)
MAPT-8 [cytosol]
(R-HSA-9619519)
0.527
4
UniProt:Q8WWY3 PRPF31
1
PRPF31 [nucleoplasm]
(R-HSA-6806772)
0.508
2
UniProt:P14678-2 SNRPB
0.499
2
UniProt:P13569 CFTR
17
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
CFTR [lysosomal membrane]
(R-HSA-5627279)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [endosome membrane]
(R-HSA-6782965)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
0.483
7
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