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SNRPF [cytosol]
Stable Identifier
R-HSA-191852
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Sm protein F, snRNP F, RUXF_HUMAN, Small nuclear ribonucleoprotein F, snRNP-F, Sm-F, SmF
Locations in the PathwayBrowser for interactor UniProt:Q13422 IKZF1
Expand all
Metabolism of RNA (Homo sapiens)
Metabolism of non-coding RNA (Homo sapiens)
snRNP Assembly (Homo sapiens)
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
SNRPF [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:P62306 SNRPF
Gene Names
SNRPF, PBSCF
Chain
initiator methionine:, chain:2-86
Reference Genes
BioGPS Gene:6636 SNRPF
COSMIC (genes):SNRPF SNRPF
CTD Gene:6636 SNRPF
dbSNP Gene:6636 SNRPF
ENSEMBL:ENSG00000139343 SNRPF
ENSEMBL_homo_sapiens_GENE:ENSG00000139343.11 SNRPF
HGNC:11162 SNRPF
KEGG Gene (Homo sapiens):6636 SNRPF
Monarch:6636 SNRPF
NCBI Gene:6636 SNRPF
OMIM:603541 SNRPF
UCSC:P62306 SNRPF
Reference Transcript
RefSeq:NM_003095.2 SNRPF
Other Identifiers
11717013_a_at
11717014_x_at
11753840_x_at
11763977_x_at
203832_PM_at
203832_at
3427016
3427017
3427018
3427019
3427021
3427023
3427024
3909005
3909010
41403_at
6636
7957649
A_23_P117068
A_24_P504405
GE60100
GO:0000387
GO:0000398
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005682
GO:0005683
GO:0005684
GO:0005685
GO:0005686
GO:0005687
GO:0005689
GO:0005737
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0030532
GO:0034709
GO:0034715
GO:0034719
GO:0036261
GO:0043226
GO:0043229
GO:0046540
GO:0065003
GO:0071005
GO:0071007
GO:0071013
GO:0120114
GO:1903241
GO:1990904
HMNXSV003050943
ILMN_2067370
X85372_at
g4507130_3p_at
g4507130_3p_x_at
Participates
as an input of
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
as a component of
snRNP Sm core complex [cytosol] (Homo sapiens)
Other forms of this molecule
SNRPF [nucleoplasm]
Inferred To
Homologues of SNRPF [cytosol]
(Canis familiaris)
SMX3 [cytosol]
(Saccharomyces cerevisiae)
SNRPF [cytosol]
(Bos taurus)
SNRPF [cytosol]
(Canis familiaris)
SNRPF [cytosol]
(Gallus gallus)
SNRPF [cytosol]
(Plasmodium falciparum)
SNRPF [cytosol]
(Sus scrofa)
SmF [cytosol]
(Drosophila melanogaster)
Snrpf [cytosol]
(Mus musculus)
Snrpf [cytosol]
(Rattus norvegicus)
smf1 [cytosol]
(Schizosaccharomyces pombe)
snrpf [cytosol]
(Danio rerio)
snrpf [cytosol]
(Dictyostelium discoideum)
snrpf [cytosol]
(Xenopus tropicalis)
snr-5 [cytosol]
(Caenorhabditis elegans)
Cross References
RefSeq
NP_003086.1
OpenTargets
ENSG00000139343
HPA
ENSG00000139343-SNRPF
GeneCards
P62306
Ensembl
ENSG00000139343
,
ENST00000266735
,
ENSP00000266735
PRO
P62306
Pharos - Targets
P62306
PDB
7VPX
,
8Y6O
,
8Q7V
,
5XJU
,
7W5B
,
7A5P
,
6QX9
,
5XJT
,
7QTT
,
7W5A
,
5Z56
,
8RC0
,
5YZG
,
5XJQ
,
3PGW
,
8Y7E
,
4PJO
,
6ID0
,
8QO9
,
3CW1
,
7EVO
,
5XJC
,
8Q7X
,
6V4X
,
6AH0
,
4F7U
,
5Z58
,
5XJS
,
7B0Y
,
8Q7Q
,
4V98
,
5XJR
,
8C6J
,
8HK1
,
6ID1
,
8Q91
,
6ICZ
,
7W59
,
5Z57
,
6Y5Q
,
5XJL
,
6QDV
,
5MQF
,
6FF7
,
7ABI
,
6QW6
,
8CH6
,
7DVQ
,
4WZJ
,
7ABG
,
5O9Z
,
3JCR
,
6Y53
,
8Q7W
Interactors (104)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62304 SNRPE
2
SNRPE [nucleoplasm]
(R-HSA-71905)
SNRPE [cytosol]
(R-HSA-191782)
0.93
14
UniProt:P62316 SNRPD2
2
SNRPD2 [nucleoplasm]
(R-HSA-71901)
SNRPD2 [cytosol]
(R-HSA-191810)
0.885
15
UniProt:Q9Y4Y9 LSM5
2
LSM5 [cytosol]
(R-HSA-429839)
LSM5 [nucleoplasm]
(R-HSA-6806795)
0.879
13
UniProt:O14893 GEMIN2
2
GEMIN2 [nucleoplasm]
(R-HSA-191795)
GEMIN2 [cytosol]
(R-HSA-191835)
0.873
14
UniProt:P54105 CLNS1A
1
CLNS1A [cytosol]
(R-HSA-191796)
0.829
9
UniProt:P14678 SNRPB
4
SNRPB [nucleoplasm]
(R-HSA-71896)
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [cytosol]
(R-HSA-191798)
2xMe-SNRPB [cytosol]
(R-HSA-192218)
0.793
7
UniProt:Q16637 SMN1
2
SMN1 [nucleoplasm]
(R-HSA-191892)
SMN1 [cytosol]
(R-HSA-191839)
0.788
7
UniProt:P38432 COIL
0.782
7
UniProt:Q8WXD5 GEMIN6
2
GEMIN6 [nucleoplasm]
(R-HSA-191799)
GEMIN6 [cytosol]
(R-HSA-191771)
0.759
5
UniProt:Q15428 SF3A2
1
SF3A2 [nucleoplasm]
(R-HSA-71964)
0.744
6
UniProt:O95400 CD2BP2
1
CD2BP2 [nucleoplasm]
(R-HSA-72054)
0.744
6
UniProt:Q9UK45 LSM7
2
LSM7 [nucleoplasm]
(R-HSA-6806802)
LSM7 [cytosol]
(R-HSA-2028610)
0.743
7
UniProt:P09661 SNRPA1
1
SNRPA1 [nucleoplasm]
(R-HSA-71958)
0.738
5
UniProt:O60306 AQR
1
AQR [nucleoplasm]
(R-HSA-6781960)
0.731
5
UniProt:P08621 SNRNP70
1
SNRNP70 [nucleoplasm]
(R-HSA-71913)
0.725
7
UniProt:Q9NSC5 HOMER3
1
HOMER3 [cytosol]
(R-HSA-6794236)
0.718
9
UniProt:P62310 LSM3
2
LSM3 [nucleoplasm]
(R-HSA-6806807)
LSM3 [cytosol]
(R-HSA-429894)
0.666
4
UniProt:P62312 LSM6
2
LSM6 [cytosol]
(R-HSA-429936)
LSM6 [nucleoplasm]
(R-HSA-6806794)
0.659
3
UniProt:P83369 LSM11
1
LSM11 [nucleoplasm]
(R-HSA-110760)
0.643
4
UniProt:Q96LT9 RNPC3
1
RNPC3 [nucleoplasm]
(R-HSA-6787844)
0.643
4
UniProt:Q8TEQ6 GEMIN5
2
GEMIN5 [cytosol]
(R-HSA-191833)
GEMIN5 [nucleoplasm]
(R-HSA-191765)
0.643
4
UniProt:P08579 SNRPB2
1
SNRPB2 [nucleoplasm]
(R-HSA-71960)
0.643
5
UniProt:O60508 CDC40
1
CDC40 [nucleoplasm]
(R-HSA-72062)
0.643
4
UniProt:Q9UHI6 DDX20
2
DDX20 [nucleoplasm]
(R-HSA-191847)
DDX20 [cytosol]
(R-HSA-191838)
0.643
4
UniProt:Q9Y333 LSM2
2
LSM2 [nucleoplasm]
(R-HSA-71894)
LSM2 [cytosol]
(R-HSA-429849)
0.643
3
UniProt:Q15020 SART3
0.643
4
UniProt:Q9BWU0 NADAP
0.643
3
UniProt:Q9UBB9 TFIP11
1
TFIP11 [nucleoplasm]
(R-HSA-8869310)
0.643
4
UniProt:Q6P2Q9 PRPF8
1
PRPF8 [nucleoplasm]
(R-HSA-83810)
0.643
5
UniProt:Q9HCS7 XAB2
1
XAB2 [nucleoplasm]
(R-HSA-67411)
0.643
4
UniProt:Q9NWZ8 GEMIN8
2
GEMIN8 [nucleoplasm]
(R-HSA-8932892)
GEMIN8 [cytosol]
(R-HSA-8932878)
0.643
4
UniProt:O15116 LSM1
1
LSM1 [cytosol]
(R-HSA-429976)
0.643
3
UniProt:Q9BUQ8 DDX23
1
DDX23 [nucleoplasm]
(R-HSA-71879)
0.643
4
UniProt:O94906 PRPF6
1
PRPF6 [nucleoplasm]
(R-HSA-71881)
0.643
4
UniProt:Q15427 SF3B4
1
SF3B4 [nucleoplasm]
(R-HSA-71975)
0.643
4
UniProt:Q15029 EFTUD2
1
EFTUD2 [nucleoplasm]
(R-HSA-71883)
0.643
5
UniProt:P09234 SNRPC
1
SNRPC [nucleoplasm]
(R-HSA-8865876)
0.643
5
UniProt:P57678 GEMIN4
2
GEMIN4 [nucleoplasm]
(R-HSA-191841)
GEMIN4 [cytosol]
(R-HSA-191836)
0.643
4
UniProt:O75533 SF3B1
1
SF3B1 [nucleoplasm]
(R-HSA-71968)
0.643
4
UniProt:Q13573 SNW1
1
SNW1 [nucleoplasm]
(R-HSA-351663)
0.643
3
UniProt:Q96DI7 SNRNP40
1
SNRNP40 [nucleoplasm]
(R-HSA-71877)
0.643
3
UniProt:O95777 LSM8
1
LSM8 [nucleoplasm]
(R-HSA-6806779)
0.643
3
UniProt:P09012 SNRPA
1
SNRPA [nucleoplasm]
(R-HSA-71915)
0.643
5
UniProt:Q6IEG0 SNRNP48
1
SNRNP48 [nucleoplasm]
(R-HSA-6787849)
0.643
3
UniProt:O43719 HTATSF1
1
HTATSF1 [nucleoplasm]
(R-HSA-9770246)
0.643
4
UniProt:Q15696 ZRSR2
1
ZRSR2 [nucleoplasm]
(R-HSA-8865914)
0.643
3
UniProt:Q9H6E5 STPAP
0.643
4
UniProt:Q15459 SF3A1
1
SF3A1 [nucleoplasm]
(R-HSA-71962)
0.643
5
UniProt:Q8N954 GPT11
0.643
4
UniProt:O43395 PRPF3
1
PRPF3 [nucleoplasm]
(R-HSA-6806806)
0.643
4
UniProt:Q8IYT2 CMTR2
0.643
4
UniProt:P62314 SNRPD1
3
2xMe-SNRPD1 [nucleoplasm]
(R-HSA-192215)
SNRPD1 [cytosol]
(R-HSA-191890)
2xMe-SNRPD1 [cytosol]
(R-HSA-192217)
0.643
4
UniProt:P83876 TXNL4A
1
TXNL4A [nucleoplasm]
(R-HSA-71875)
0.643
4
UniProt:Q9P2G9 KLHL8
0.643
4
UniProt:Q9Y5B6 PAXB1
0.643
3
UniProt:Q96RS0 TGS1
2
TGS1 [cytosol]
(R-HSA-192209)
TGS1 [nucleoplasm]
(R-HSA-400176)
0.643
3
UniProt:Q96GM8 TOE1
0.643
4
UniProt:O75643 SNRNP200
1
SNRNP200 [nucleoplasm]
(R-HSA-71885)
0.643
4
UniProt:P62318 SNRPD3
3
SNRPD3 [nucleoplasm]
(R-HSA-71903)
2xMe-SNRPD3 [nucleoplasm]
(R-HSA-192219)
2xMe-SNRPD3 [cytosol]
(R-HSA-191781)
0.643
3
UniProt:Q12874 SF3A3
1
SF3A3 [nucleoplasm]
(R-HSA-71966)
0.643
4
UniProt:P14678-2 SNRPB
0.623
3
UniProt:Q13422 IKZF1
0.556
3
UniProt:Q9H1P3 OSBPL2
1
OSBPL2 [cytosol]
(R-HSA-8867527)
0.556
3
UniProt:Q8TBB1 LNX1
1
LNX1 [cytosol]
(R-HSA-8851641)
0.556
3
UniProt:Q6FHY5 Q6FHY5
0.556
3
UniProt:P32969 RPL9
1
RPL9 [cytosol]
(R-HSA-72492)
0.556
3
UniProt:Q13422-7 IKZF1
0.556
3
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.556
3
UniProt:Q9BXP5 SRRT
1
SRRT [nucleoplasm]
(R-HSA-6814858)
0.547
2
UniProt:P62308 SNRPG
2
SNRPG [nucleoplasm]
(R-HSA-71909)
SNRPG [cytosol]
(R-HSA-191827)
0.547
3
UniProt:Q9HC44 GPBL1
0.527
2
UniProt:Q9H5Z1 DHX35
1
DHX35 [nucleoplasm]
(R-HSA-9770427)
0.527
3
UniProt:O43172 PRPF4
1
PRPF4 [nucleoplasm]
(R-HSA-71890)
0.527
3
UniProt:P01037 CYTN
0.527
2
UniProt:P01036 CYTS
0.527
2
UniProt:A8MWD9 RUXGL
0.527
2
UniProt:Q86VM9 ZCH18
0.527
2
UniProt:O75554 WBP4
1
WBP4 [nucleoplasm]
(R-HSA-8867895)
0.527
2
UniProt:Q9UDW3 ZMAT5
1
ZMAT5 [nucleoplasm]
(R-HSA-6787850)
0.527
2
UniProt:Q9BRR8 GPATCH1
1
GPATCH1 [nucleoplasm]
(R-HSA-9770419)
0.527
3
UniProt:P02814 SMR3B
0.527
2
UniProt:Q9BZJ0 CRNKL1
1
CRNKL1 [nucleoplasm]
(R-HSA-8867899)
0.527
3
UniProt:P63162 SNRPN
1
Me2-R108,R112-SNRPN [nucleoplasm]
(R-HSA-8865931)
0.527
3
UniProt:Q9Y312 AAR2
0.527
2
UniProt:Q13523 PRPF4B
1
PRPF4B [nucleoplasm]
(R-HSA-9769525)
0.527
2
UniProt:Q2TBE0 CWF19L2
1
CWF19L2 [nucleoplasm]
(R-HSA-9770846)
0.527
2
UniProt:Q9NW64 RBM22
1
RBM22 [nucleoplasm]
(R-HSA-5215975)
0.527
2
UniProt:O95149 SNUPN
1
SNUPN [cytosol]
(R-HSA-191857)
0.527
2
UniProt:Q9BWJ5 SF3B5
1
SF3B5 [nucleoplasm]
(R-HSA-71979)
0.527
3
UniProt:P78362 SRPK2
1
SRPK2 [cytosol]
(R-HSA-9729332)
0.527
2
UniProt:Q96DA0 PAUF
0.527
2
UniProt:Q9P0M2 AKA7G
0.527
2
UniProt:Q8WWY3 PRPF31
1
PRPF31 [nucleoplasm]
(R-HSA-6806772)
0.527
3
UniProt:Q96I25 RBM17
1
RBM17 [nucleoplasm]
(R-HSA-8865891)
0.527
2
UniProt:Q7L2J0 MEPCE
0.527
3
UniProt:Q96DR5 BPIFA2
1
BPIFA2 [extracellular region]
(R-HSA-6809279)
0.527
2
UniProt:Q969L4 LSM10
1
LSM10 [nucleoplasm]
(R-HSA-58738)
0.527
2
UniProt:Q13435 SF3B2
1
SF3B2 [nucleoplasm]
(R-HSA-71971)
0.527
3
UniProt:Q16560 SNRNP35
1
SNRNP35 [nucleoplasm]
(R-HSA-6787852)
0.527
2
UniProt:O43290 SART1
1
SART1 [nucleoplasm]
(R-HSA-4615999)
0.527
2
UniProt:Q8N8D1 PDCD7
1
PDCD7 [nucleoplasm]
(R-HSA-6787851)
0.527
3
UniProt:Q8TBF4 ZCRB1
2
ZCRB1 [cytosol]
(R-HSA-9682010)
ZCRB1 [nucleoplasm]
(R-HSA-6787853)
0.527
3
UniProt:Q9BRX9 WDR83
1
WDR83 [endosome membrane]
(R-HSA-5672942)
0.527
3
UniProt:Q4G0J3 LARP7
0.483
2
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