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HDAC2 [nucleoplasm]
Stable Identifier
R-HSA-205135
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
HDA2_HUMAN, Histone deacetylase 2
Icon
Locations in the PathwayBrowser for interactor UniProt:Q9H9B1 EHMT1
Expand all
Developmental Biology (Homo sapiens)
Nervous system development (Homo sapiens)
EGR2 and SOX10-mediated initiation of Schwann cell myelination (Homo sapiens)
SOX10 dimer binds the POU3F1 promoter (Homo sapiens)
HDAC2 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Negative epigenetic regulation of rRNA expression (Homo sapiens)
NoRC negatively regulates rRNA expression (Homo sapiens)
Nucleolar Remodelling Complex (NoRC) binds intergenic region of rDNA (Homo sapiens)
HDAC2 [nucleoplasm] (Homo sapiens)
Metabolism of proteins (Homo sapiens)
Post-translational protein modification (Homo sapiens)
SUMOylation (Homo sapiens)
SUMO E3 ligases SUMOylate target proteins (Homo sapiens)
SUMOylation of chromatin organization proteins (Homo sapiens)
SUMOylation of HDAC2 with SUMO1 (Homo sapiens)
HDAC2 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q92769 HDAC2
Gene Names
HDAC2
Chain
chain:1-488
Reference Genes
BioGPS Gene:3066 HDAC2
COSMIC (genes):HDAC2 HDAC2
CTD Gene:3066 HDAC2
dbSNP Gene:3066 HDAC2
ENSEMBL:ENSG00000196591 HDAC2
ENSEMBL_homo_sapiens_GENE:ENSG00000196591.12 HDAC2
HGNC:4853 HDAC2
KEGG Gene (Homo sapiens):3066 HDAC2
Monarch:3066 HDAC2
NCBI Gene:3066 HDAC2
OMIM:605164 HDAC2
UCSC:Q92769 HDAC2
Reference Transcript
RefSeq:XM_017010799.1 HDAC2
RefSeq:XM_011535788.1 HDAC2
RefSeq:NM_001527.3 HDAC2
Other Identifiers
11727379_at
11754781_a_at
201833_PM_at
201833_at
242141_PM_at
242141_at
2970534
2970535
2970536
2970537
2970538
2970539
2970540
2970541
2970542
2970543
2970544
2970545
2970546
2970548
2970549
2970550
2970551
2970552
2970553
2970556
2970557
2970562
2970566
2970567
2970571
2970573
2970575
2970577
2970578
2970579
2970580
2970581
2970582
2970583
3066
34368_at
8129045
A_23_P122304
A_33_P3309924
GE81034
GE860085
GO:0000118
GO:0000122
GO:0000228
GO:0000781
GO:0000785
GO:0001975
GO:0003012
GO:0003300
GO:0003677
GO:0003682
GO:0003723
GO:0003824
GO:0004407
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005737
GO:0006325
GO:0006338
GO:0006351
GO:0006355
GO:0008284
GO:0009410
GO:0009913
GO:0010718
GO:0010944
GO:0010977
GO:0012501
GO:0016358
GO:0016575
GO:0016581
GO:0016787
GO:0019213
GO:0019899
GO:0022414
GO:0023052
GO:0030154
GO:0030336
GO:0030512
GO:0031000
GO:0031072
GO:0031492
GO:0031507
GO:0032496
GO:0032732
GO:0032760
GO:0032922
GO:0032967
GO:0032991
GO:0033558
GO:0034605
GO:0035094
GO:0035098
GO:0036211
GO:0042220
GO:0042393
GO:0042475
GO:0042531
GO:0042659
GO:0042733
GO:0042826
GO:0043066
GO:0043226
GO:0043433
GO:0045347
GO:0045862
GO:0045892
GO:0045893
GO:0045944
GO:0048149
GO:0048511
GO:0048714
GO:0048856
GO:0048870
GO:0051059
GO:0055093
GO:0060789
GO:0061000
GO:0061029
GO:0061198
GO:0061629
GO:0070301
GO:0070822
GO:0071300
GO:0071560
GO:0140096
GO:0140297
GO:0160008
GO:0160009
GO:0160010
GO:1902437
GO:1902455
GO:1902459
GO:1903351
GO:1904645
GO:1990841
GO:2000273
GO:2000736
GO:2000757
HMNXSV003001184
Hs.232662.0.A1_3p_at
Hs.232662.0.A1_3p_x_at
ILMN_1767747
PH_hs_0000406
TC06002035.hg
TC06003812.hg
U31814_at
g4557640_3p_at
Participates
as an input of
SUMOylation of HDAC2 with SUMO1 (Homo sapiens)
Nucleolar Remodelling Complex (NoRC) binds intergenic region of rDNA (Homo sapiens)
SOX10 dimer binds the POU3F1 promoter (Homo sapiens)
as a component of
NoRC:pRNA:HDAC:DNMT [nucleoplasm] (Homo sapiens)
HDAC2 homodimer [nucleoplasm] (Homo sapiens)
POU3F1 gene:SOX10 dimer:HDAC2:SMARCA4 [nucleoplasm] (Homo sapiens)
HDAC1:HDAC2 [nucleoplasm] (Homo sapiens)
as a member of
Histone deacetylase [nucleoplasm] (Homo sapiens)
as a candidate of
HDAC [nucleoplasm] (Homo sapiens)
Other forms of this molecule
monoSUMO1-K462-HDAC2 [nucleoplasm]
Inferred To
Homologues of HDAC2 [nucleoplasm]
(Caenorhabditis elegans)
hda-1 [nucleoplasm]
(Caenorhabditis elegans)
clr6 [nucleoplasm]
(Schizosaccharomyces pombe)
HDAC1 [nucleoplasm]
(Drosophila melanogaster)
Hdac2 [nucleoplasm]
(Mus musculus)
Hdac2 [nucleoplasm]
(Rattus norvegicus)
RPD3 [nucleoplasm]
(Saccharomyces cerevisiae)
HDAC2 [nucleoplasm]
(Bos taurus)
HDAC2 [nucleoplasm]
(Caenorhabditis elegans)
HDAC2 [nucleoplasm]
(Canis familiaris)
HDAC2 [nucleoplasm]
(Dictyostelium discoideum)
HDAC2 [nucleoplasm]
(Gallus gallus)
HDAC2 [nucleoplasm]
(Plasmodium falciparum)
HDAC2 [nucleoplasm]
(Sus scrofa)
HDAC2 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
XP_011534090.1
,
NP_001518.3
,
XP_016866288.1
ZINC - World Drugs
HDAC2_HUMAN
Guide to Pharmacology - Targets
2616
OpenTargets
ENSG00000196591
ZINC - FDA approved
HDAC2_HUMAN
ZINC - Substances
HDAC2_HUMAN
ZINC - Biogenic
HDAC2_HUMAN
ZINC target
Q92769
PRO
Q92769
PDB
8C60
,
7MOY
,
7ZZS
,
6XDM
,
7ZZR
,
8A0B
,
7MOX
,
6WI3
,
6WHZ
,
7ZZP
,
8BPC
,
7LTL
,
7MOT
,
8BPB
,
7LTK
,
7KBH
,
6G3O
,
3MAX
,
6WHQ
,
7MOS
,
7ZZO
,
6XEC
,
8BPA
,
7KBG
,
5IX0
,
6WHO
,
7LTG
,
6WBZ
,
7JS8
,
4LXZ
,
7ZZW
,
6WBW
,
6XEB
,
7ZZU
,
5IWG
,
6WHN
,
4LY1
,
7MOZ
,
7ZZT
ZINC - Investigational
HDAC2_HUMAN
ZINC - Metabolites
HDAC2_HUMAN
GeneCards
Q92769
HPA
ENSG00000196591-HDAC2
Ensembl
ENSP00000430008
,
ENSP00000430432
,
ENST00000368632
,
ENSG00000196591
,
ENST00000519108
,
ENST00000519065
,
ENSP00000357621
Pharos - Targets
Q92769
ZINC - Predictions - Purchasable
HDAC2_HUMAN
HMDB Protein
HMDBP09107
Interactors (88)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q13547 HDAC1
2
HDAC1 [nucleoplasm]
(R-HSA-205021)
monoSUMO1-K444,K476-HDAC1 [nucleoplasm]
(R-HSA-4616030)
0.946
21
UniProt:Q13330 MTA1
2
MTA1 [nucleoplasm]
(R-HSA-3465550)
polySUMO2,3-K509-MTA1 [nucleoplasm]
(R-HSA-3465537)
0.886
7
UniProt:Q96ST3 SIN3A
2
SIN3A [nucleoplasm]
(R-HSA-351657)
monoSUMO1-SIN3A [nucleoplasm]
(R-HSA-4086071)
0.878
7
UniProt:O94776 MTA2
1
MTA2 [nucleoplasm]
(R-HSA-4657009)
0.877
9
UniProt:O60341 KDM1A
1
KDM1A [nucleoplasm]
(R-HSA-996769)
0.837
9
UniProt:Q16576 RBBP7
1
RBBP7 [nucleoplasm]
(R-HSA-212227)
0.837
8
UniProt:Q9NP66 HM20A
0.837
7
UniProt:Q9UKL0 RCOR1
1
RCOR1 [nucleoplasm]
(R-HSA-996766)
0.837
6
UniProt:Q9BTC8 MTA3
1
MTA3 [nucleoplasm]
(R-HSA-4657013)
0.837
7
UniProt:Q8WXI9 GATAD2B
1
GATAD2B [nucleoplasm]
(R-HSA-3702079)
0.837
7
UniProt:O95983 MBD3
1
MBD3 [nucleoplasm]
(R-HSA-4657010)
0.812
6
UniProt:Q86YP4 GATAD2A
1
GATAD2A [nucleoplasm]
(R-HSA-3702077)
0.788
5
UniProt:Q14839 CHD4
1
CHD4 [nucleoplasm]
(R-HSA-3702078)
0.788
6
UniProt:Q9UBW7 ZMYM2
6
ZMYM2(1-913)-p-FGFR1(429-822) fusion [cytosol]
(R-HSA-1839016)
ZMYM2(1-913)-FGFR1(429-822) fusion [cytosol]
(R-HSA-1604544)
ZMYM2(1-1059)-p-4Y-FLT3(594-993) fusion [cytosol]
(R-HSA-9703309)
ZMYM2(1-1057)-p-5Y-FLT3(586-993) fusion [cytosol]
(R-HSA-9703319)
ZMYM2(1-1059)-FLT3(594-993) fusion [cytosol]
(R-HSA-9703310)
ZMYM2(1-1057)-FLT3(586-993) fusion [cytosol]
(R-HSA-9703311)
0.788
5
UniProt:Q09028 RBBP4
1
RBBP4 [nucleoplasm]
(R-HSA-212223)
0.788
8
UniProt:Q6PJG2 MDEAS
0.788
5
UniProt:Q9UBB5 MBD2
1
MBD2 [nucleoplasm]
(R-HSA-427367)
0.788
5
UniProt:Q8N108 MIER1
0.725
4
UniProt:Q14687 GSE1
0.725
4
UniProt:O14519 CDKA1
0.725
5
UniProt:O75446 SAP30
1
SAP30 [nucleoplasm]
(R-HSA-351693)
0.725
4
UniProt:Q9P2K3 RCOR3
0.725
4
UniProt:Q9P0W2 HMG20B
1
HMG20B [nucleoplasm]
(R-HSA-996745)
0.725
5
UniProt:Q12873 CHD3
2
CHD3 [nucleoplasm]
(R-HSA-4657012)
monoSUMO1-K1971-CHD3 [nucleoplasm]
(R-HSA-8956372)
0.725
5
UniProt:Q9Y232 CDYL
0.725
5
UniProt:Q9HCU9 BRMS1
1
BRMS1 [nucleoplasm]
(R-HSA-4650034)
0.723
4
UniProt:Q9C0K0 BC11B
0.695
5
UniProt:Q96KQ7 EHMT2
1
EHMT2 [nucleoplasm]
(R-HSA-212151)
0.69
8
UniProt:Q92618 ZN516
0.662
7
UniProt:Q96BD5 PHF21A
1
PHF21A [nucleoplasm]
(R-HSA-996754)
0.643
3
UniProt:Q92766 RREB1
0.643
3
UniProt:P61964 WDR5
1
WDR5 [nucleoplasm]
(R-HSA-1629838)
0.643
3
UniProt:Q8N344 MIER2
0.643
4
UniProt:O75182 SIN3B
1
SIN3B [nucleoplasm]
(R-HSA-3006450)
0.643
3
UniProt:Q8IZ40 RCOR2
0.643
3
UniProt:Q9NP50 SHCAF
0.643
3
UniProt:Q9H0E3 SAP130
1
SAP130 [nucleoplasm]
(R-HSA-3006732)
0.643
3
UniProt:Q6PH81 CP087
0.643
4
UniProt:Q9H147 TDIF1
0.643
4
UniProt:Q9BYE7 PCGF6
1
PCGF6 [nucleoplasm]
(R-HSA-8953572)
0.643
4
UniProt:Q7Z3K6 MIER3
0.643
3
UniProt:Q9H7L9 SUDS3
2
K63polyUb-SUDS3 [nucleoplasm]
(R-HSA-6782790)
SUDS3 [nucleoplasm]
(R-HSA-351696)
0.643
3
UniProt:Q13363 CTBP1
3
monoSUMO1-K428-CTBP1 [nucleoplasm]
(R-HSA-3108200)
polySUMO2,3-K428-CTBP1 [nucleoplasm]
(R-HSA-3108226)
CTBP1 [nucleoplasm]
(R-HSA-212372)
0.643
9
UniProt:O60315 ZEB2
1
ZEB2 [nucleoplasm]
(R-HSA-3108222)
0.597
5
UniProt:P68400 CSNK2A1
2
CSNK2A1 [nucleoplasm]
(R-HSA-6805057)
CSNK2A1 [cytosol]
(R-HSA-201713)
0.59
3
UniProt:P0DTD1-PRO_0000449623 REP
0.589
2
UniProt:Q9HD15 SRA1
0.589
2
UniProt:P01106 MYC
2
PolyUb-MYC [nucleoplasm]
(R-HSA-6783169)
MYC [nucleoplasm]
(R-HSA-188379)
0.564
2
UniProt:Q2HR82 KBZIP
0.537
7
UniProt:Q8N5A5 ZGPAT
0.532
3
UniProt:O95785 WIZ
0.527
2
UniProt:Q969G3 SMARCE1
1
SMARCE1 [nucleoplasm]
(R-HSA-389258)
0.527
2
UniProt:P37275 ZEB1
1
ZEB1 [nucleoplasm]
(R-HSA-6789836)
0.527
2
UniProt:Q14865 ARID5B
1
ARID5B [nucleoplasm]
(R-HSA-5423050)
0.527
2
UniProt:Q9HAJ7 SAP30L
1
SAP30L [nucleoplasm]
(R-HSA-351698)
0.527
2
UniProt:Q9H165 BCL11A
2
BCL11A(1-219)insDHPPA-ALK(1058-1620) fusion [cytosol]
(R-HSA-9713444)
BCL11A(1-219)insDHPPA-p-7Y-ALK(1058-1620) fusion [cytosol]
(R-HSA-9713447)
0.527
2
UniProt:Q8WWY6 MB3L1
0.527
3
UniProt:Q9UKG1 APPL1
1
APPL1 [endosome membrane]
(R-HSA-373630)
0.527
2
UniProt:Q9P2Y4 ZN219
0.527
4
UniProt:Q4LE39 ARID4B
1
ARID4B [nucleoplasm]
(R-HSA-2976647)
0.527
2
UniProt:Q9ULU4 ZMYD8
0.527
2
UniProt:Q9H9B1 EHMT1
1
EHMT1 [nucleoplasm]
(R-HSA-1183226)
0.527
2
UniProt:O95567 CV031
0.527
2
UniProt:Q96A08 H2BC1
9
HIST1H2BA [nucleoplasm]
(R-HSA-181916)
Ub-122-HIST1H2BA [nucleoplasm]
(R-HSA-3364020)
AcK22-HIST1H2BA [nucleoplasm]
(R-HSA-4568647)
AcK17-HIST1H2BA [nucleoplasm]
(R-HSA-4568631)
AcK14-HIST1H2BA [nucleoplasm]
(R-HSA-4568615)
AcK7-HIST1H2BA [nucleoplasm]
(R-HSA-4568624)
HIST1H2BA [extracellular region]
(R-HSA-977582)
AcK-HIST1H2BA [nucleoplasm]
(R-HSA-4549263)
Ub-HIST1H2BA [nucleoplasm]
(R-HSA-6782561)
0.527
3
UniProt:Q9UHF7 TRPS1
0.527
2
UniProt:O75956 CDKA2
0.527
2
UniProt:Q14202 ZMYM3
0.527
2
UniProt:O75362 ZNF217
1
ZNF217 [nucleoplasm]
(R-HSA-9011738)
0.527
2
UniProt:Q9UK53 ING1
0.527
3
UniProt:Q9H160 ING2
2
monoSUMO1-K195-ING2 [nucleoplasm]
(R-HSA-4086075)
ING2 [nucleoplasm]
(R-HSA-3215167)
0.527
3
UniProt:P52294 KPNA1
2
KPNA1 [cytosol]
(R-HSA-180612)
KPNA1 [nucleoplasm]
(R-HSA-188865)
0.527
2
UniProt:Q969R5 L3MBTL2
2
L3MBTL2 [nucleoplasm]
(R-HSA-6804477)
polySUMO2-K675,K700-L3MBTL2 [nucleoplasm]
(R-HSA-6804480)
0.527
3
UniProt:O75461 E2F6
2
E2F6 [nucleoplasm]
(R-HSA-8953089)
p-S12-E2F6 [nucleoplasm]
(R-HSA-9007536)
0.527
2
UniProt:O95863 SNAI1
1
SNAI1 [nucleoplasm]
(R-HSA-2980903)
0.525
2
UniProt:O43463 SUV39H1
1
SUV39H1 [nucleoplasm]
(R-HSA-427517)
0.524
3
UniProt:Q9UIS9 MBD1
2
monoSUMO1-K499,K538-MBD1 [nucleoplasm]
(R-HSA-4090331)
MBD1 [nucleoplasm]
(R-HSA-417134)
0.524
2
UniProt:Q9UER7 DAXX
13
monoSUMO1-K630,K631-DAXX [nucleoplasm]
(R-HSA-4086086)
DAXX L98Vfs*13 [nucleoplasm]
(R-HSA-9673102)
DAXX R48Vfs*93 [nucleoplasm]
(R-HSA-9673103)
DAXX C74* [nucleoplasm]
(R-HSA-9673096)
DAXX S138* [nucleoplasm]
(R-HSA-9673081)
DAXX H26Tfs*118 [nucleoplasm]
(R-HSA-9673114)
DAXX E104* [nucleoplasm]
(R-HSA-9673078)
DAXX E72Nfs*72 [nucleoplasm]
(R-HSA-9673110)
DAXX C106* [nucleoplasm]
(R-HSA-9673079)
DAXX A103Sfs*40 [nucleoplasm]
(R-HSA-9673121)
DAXX K56* [nucleoplasm]
(R-HSA-9673089)
DAXX A36Qfs*108 [nucleoplasm]
(R-HSA-9673105)
DAXX [nucleoplasm]
(R-HSA-3222068)
0.524
2
UniProt:P53350 PLK1
4
PLK1 [nucleoplasm]
(R-HSA-156720)
p-T210-PLK1 [cytosol]
(R-HSA-3000318)
p-T210-PLK1 [nucleoplasm]
(R-HSA-3002800)
PLK1 [cytosol]
(R-HSA-164603)
0.508
2
UniProt:Q17R98 ZN827
0.499
2
UniProt:Q9H3M7 TXNIP
2
TXNIP [cytosol]
(R-HSA-1250246)
TXNIP [nucleoplasm]
(R-HSA-9617747)
0.499
3
UniProt:P51610 HCFC1
2
HCFC1 [nucleoplasm]
(R-HSA-1592209)
K48polyUb,K63polyUb-HCFC1 [nucleoplasm]
(R-HSA-5690821)
0.499
2
UniProt:P48382 RFX5
0.499
4
UniProt:P13569 CFTR
17
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
CFTR [lysosomal membrane]
(R-HSA-5627279)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [endosome membrane]
(R-HSA-6782965)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
0.483
6
UniProt:P03372 ESR1
10
p-S118-ESR1 [nucleoplasm]
(R-HSA-9024210)
monoSUMO1-5K-ESR1 [nucleoplasm]
(R-HSA-4090302)
p-S167-ESR1 [nucleoplasm]
(R-HSA-9841867)
p-S167-ESR1 [cytosol]
(R-HSA-9841254)
Me260-ESR1 [cytosol]
(R-HSA-9632177)
PalmS-ESR1 [cytosol]
(R-HSA-9020974)
Me260-PalmS-ESR1 [plasma membrane]
(R-HSA-9637788)
PalmS-ESR1 [plasma membrane]
(R-HSA-9021057)
ESR1 [nucleoplasm]
(R-HSA-446168)
ESR1 [cytosol]
(R-HSA-9020968)
0.462
2
UniProt:Q9BSJ6 PIMRE
0.462
2
UniProt:A2A935 Prdm16
2
Prdm16 [nucleoplasm]
(R-MMU-9854760)
Prdm16 [cytosol]
(R-MMU-5634812)
0.462
2
UniProt:P17542 TAL1
1
TAL1 [nucleoplasm]
(R-HSA-8956511)
0.462
3
UniProt:P23771 GATA3
2
GATA3 [nucleoplasm]
(R-HSA-996768)
PolyUb-GATA3 [nucleoplasm]
(R-HSA-6783009)
0.462
4
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