Reactome | APOE [early endosome]

APOE [early endosome]

Stable Identifier

R-HSA-2429687

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

early endosome

Synonyms

apoE, apolipoprotein E

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P02649 APOE

Gene Names

APOE

Chain

signal peptide:1-18, chain:19-317

Reference Genes

BioGPS Gene:348 APOE

COSMIC (genes):APOE APOE

CTD Gene:348 APOE

dbSNP Gene:348 APOE

ENSEMBL:ENSG00000130203 APOE

HGNC:613 APOE

KEGG Gene (Homo sapiens):348 APOE

Monarch:348 APOE

NCBI Gene:348 APOE

OMIM:107741 APOE

UCSC:P02649 APOE

Reference Transcript

Other Identifiers

0001090075

11744068_x_at

16863115

203381_s_at

203382_s_at

212884_x_at

348

3835880

3835883

3835884

3835886

3835887

3835888

3835889

3835890

608_at

8029530

A_14_P133396

A_23_P164650

A_33_P3223592

GE80881

GO:0000302

GO:0000902

GO:0001523

GO:0001540

GO:0001937

GO:0002021

GO:0002376

GO:0003013

GO:0003674

GO:0005102

GO:0005198

GO:0005319

GO:0005515

GO:0005543

GO:0005575

GO:0005576

GO:0005615

GO:0005622

GO:0005634

GO:0005737

GO:0005768

GO:0005769

GO:0005783

GO:0005788

GO:0005794

GO:0005886

GO:0006357

GO:0006464

GO:0006629

GO:0006641

GO:0006707

GO:0006810

GO:0006869

GO:0006874

GO:0006898

GO:0006950

GO:0006979

GO:0007010

GO:0007165

GO:0007186

GO:0007263

GO:0007267

GO:0007271

GO:0007616

GO:0008092

GO:0008150

GO:0008201

GO:0008202

GO:0008203

GO:0008219

GO:0008283

GO:0008289

GO:0009056

GO:0009058

GO:0010468

GO:0010544

GO:0010596

GO:0010629

GO:0010873

GO:0010875

GO:0010877

GO:0010976

GO:0010977

GO:0015031

GO:0015909

GO:0016020

GO:0016192

GO:0016209

GO:0017038

GO:0019068

GO:0019934

GO:0022607

GO:0030154

GO:0030195

GO:0030234

GO:0030425

GO:0030516

GO:0030669

GO:0031012

GO:0031175

GO:0031410

GO:0032269

GO:0032489

GO:0032805

GO:0032991

GO:0033344

GO:0033700

GO:0034330

GO:0034361

GO:0034362

GO:0034363

GO:0034364

GO:0034365

GO:0034371

GO:0034372

GO:0034374

GO:0034375

GO:0034378

GO:0034380

GO:0034382

GO:0034384

GO:0034447

GO:0034641

GO:0035641

GO:0040007

GO:0040011

GO:0042157

GO:0042158

GO:0042159

GO:0042311

GO:0042592

GO:0042627

GO:0042632

GO:0042802

GO:0042803

GO:0042981

GO:0042982

GO:0043025

GO:0043083

GO:0043085

GO:0043167

GO:0043226

GO:0043254

GO:0043395

GO:0043407

GO:0043524

GO:0043537

GO:0043687

GO:0043691

GO:0044267

GO:0044281

GO:0044403

GO:0044794

GO:0044877

GO:0045088

GO:0045541

GO:0045807

GO:0045893

GO:0046889

GO:0046907

GO:0046911

GO:0046983

GO:0048156

GO:0048168

GO:0048844

GO:0048856

GO:0048870

GO:0050709

GO:0050728

GO:0050750

GO:0050877

GO:0051000

GO:0051044

GO:0051246

GO:0051651

GO:0055088

GO:0055089

GO:0060228

GO:0060999

GO:0061024

GO:0061136

GO:0061771

GO:0062023

GO:0065003

GO:0070062

GO:0070326

GO:0070328

GO:0070374

GO:0071682

GO:0071813

GO:0071830

GO:0071831

GO:0072358

GO:0072562

GO:0090090

GO:0090181

GO:0090209

GO:0097006

GO:0097113

GO:0097114

GO:0098869

GO:0098978

GO:0120009

GO:0120020

GO:1900221

GO:1900223

GO:1900272

GO:1902430

GO:1902952

GO:1902991

GO:1902995

GO:1903002

GO:1903561

GO:1905855

GO:1905860

GO:1905890

GO:1905906

GO:1905907

GO:1905908

GO:1990777

GO:2000822

Hs.169401.0.S1_3p_a_at

ILMN_1740938

M12529_at

PH_hs_0022287

TC19000633.hg

g4557324_3p_a_at

Participant Of

output

NREH hydrolyses atREs (HSPG:apoE) to atROL and FAs

hasComponent

Other forms of this molecule

APOE [endocytic vesicle lumen]

APOE [endosome lumen]

APOE [endosome membrane]

APOE [clathrin-coated endocytic vesicle membrane]

APOE [plasma membrane]

p-APOE [endoplasmic reticulum lumen]

APOE [endoplasmic reticulum lumen]

APOE [extracellular region]

Inferred To

apoeb [early endosome] (Danio rerio)

Apoe [early endosome] (Mus musculus)

Apoe [early endosome] (Rattus norvegicus)

Cross References

RefSeq

NP_001289620.1, NP_001289618.1, NP_001289617.1, NP_000032.1, NP_001289619.1

OpenTargets

ENSG00000130203

HPA

ENSG00000130203-APOE

GeneCards

P02649

Ensembl

ENSG00000130203, ENSP00000252486, ENST00000252486

PRO

P02649

Orphanet

15940

HMDB Protein

HMDBP01986

PDB

1GS9, 1BZ4, 1OR3, 1OEG, 1NFN, 1H7I, 1LE2, 1EA8, 1OR2, 1OEF, 6NCO, 2L7B, 1B68, 2KNY, 1LE4, 1NFO, 6IWB, 1LPE, 6NCN, 2KC3

Interactors (50)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P37840 SNCA	4	SNCA [extracellular region] (R-HSA-976954) SNCA A30P [cytosol] (R-HSA-5658569) SNCA [cytosol] (R-HSA-5658500) Ub-SNCA [cytosol] (R-HSA-5660754)	0.809	11
UniProt:Q07954 LRP1	3	LRP1 [plasma membrane] (R-HSA-1454844) LRP1 [endocytic vesicle membrane] (R-HSA-2230981) LRP1 [plasma membrane] (R-HSA-2424272)	0.784	23
UniProt:P05067-PRO_0000000093 APP			0.75	4
UniProt:P01130 LDLR	4	LDLR [endosome membrane] (R-HSA-171127) LDLR [endolysosome membrane] (R-HSA-6784818) LDLR [clathrin-coated endocytic vesicle membrane] (R-HSA-171105) LDLR [plasma membrane] (R-HSA-171053)	0.71	4
UniProt:P00738 HP	7	7xHC-HP(19-160) [endocytic vesicle lumen] (R-HSA-2230994) 5xHC-HP(162-406) [endocytic vesicle lumen] (R-HSA-2230973) 5xHC-HP(162-406) [extracellular region] (R-HSA-2168875) HP [tertiary granule lumen] (R-HSA-6800879) HP [extracellular region] (R-HSA-6799677) HP [specific granule lumen] (R-HSA-6799622) 7xHC-HP(19-160) [extracellular region] (R-HSA-2168848)	0.675	7
UniProt:P08603 CFH	1	CFH [extracellular region] (R-HSA-976788)	0.672	8
ChEBI:28304 HEPARIN			0.645	5
UniProt:P02649 APOE	9	APOE [endosome lumen] (R-HSA-174804) APOE [endocytic vesicle lumen] (R-HSA-3221641) APOE [endosome membrane] (R-HSA-174766) APOE [clathrin-coated endocytic vesicle membrane] (R-HSA-174651) APOE [plasma membrane] (R-HSA-174615) APOE [early endosome] (R-HSA-2429687) p-APOE [endoplasmic reticulum lumen] (R-HSA-8956980) APOE [endoplasmic reticulum lumen] (R-HSA-6784908) APOE [extracellular region] (R-HSA-174646)	0.641	9
UniProt:Q9NZC2 TREM2	1	TREM2 [plasma membrane] (R-HSA-197664)	0.602	4
UniProt:O75069 TMCC2			0.593	5
ChEBI:241349 DIMYRISTOYLPHOSPHATIDYL CHOLINE			0.59	3
UniProt:Q9HBG4 ATP6V0A4	2	ATP6V0A4 [endosome membrane] (R-HSA-912605) ATP6V0A4 [phagocytic vesicle membrane] (R-HSA-1222302)	0.556	3
UniProt:P11137-4 MAP2			0.556	3
UniProt:P02795 MT2A	1	MT2A [cytosol] (R-HSA-1031707)	0.556	3
UniProt:Q06481-5 APLP2			0.556	3
UniProt:Q9UIJ7 AK3	1	AK3 [mitochondrial matrix] (R-HSA-1008241)	0.556	3
UniProt:Q3SYB3 FX4L6			0.556	3
UniProt:Q9NUB4 CT141			0.556	3
UniProt:Q6PID6 TTC33			0.556	3
UniProt:P10636-6 MAPT			0.556	3
UniProt:Q9Y3D2 MSRB2	1	MSRB2 [cytosol] (R-HSA-5676906)	0.556	3
UniProt:Q8IUW6 Q8IUW6			0.556	3
IntAct:EBI-25832170 ORF			0.556	3
UniProt:Q13829 BACD2			0.556	3
UniProt:Q8IUW3 SPA2L			0.556	3
UniProt:Q14114-3 Q141143			0.556	3
UniProt:Q9NS23-4 RASSF1			0.556	3
UniProt:Q6ZNA4-2 Q6ZNA42			0.556	3
IntAct:EBI-25831191 CCSB			0.556	3
UniProt:Q9Y6C2-2 EMILIN1			0.556	3
UniProt:Q9NYH9 UTP6	1	UTP6 [nucleoplasm] (R-HSA-6790674)	0.556	3
UniProt:Q9H6J7-2 C11ORF49			0.556	3
UniProt:P17028 ZNF24			0.556	3
UniProt:P09382 LGALS1	2	LGALS1 [endoplasmic reticulum lumen] (R-HSA-8956711) p-LGALS1 [endoplasmic reticulum lumen] (R-HSA-8957003)	0.556	3
IntAct:EBI-25832355 CCSB			0.556	3
UniProt:Q8IY40 Q8IY40			0.556	3
UniProt:Q9H816 DCLRE1B	1	DCLRE1B [nucleoplasm] (R-HSA-6785735)	0.556	3
UniProt:O75409 HYPM			0.556	3
UniProt:Q9BYZ2 LDHAL6B	1	LDHAL6B [mitochondrial matrix] (R-HSA-6807613)	0.556	3
UniProt:P26441 CNTF	1	CNTF [extracellular region] (R-HSA-5696441)	0.556	3
UniProt:Q8TBC4 UBA3	2	G76-NEDD8-C237-UBA3 [cytosol] (R-HSA-8951640) UBA3 [cytosol] (R-HSA-947632)	0.556	3
UniProt:Q8WTV0-2 SCARB1	2	SCARB1-2 [plasma membrane] (R-HSA-349415) SCARB1-2 [endocytic vesicle membrane] (R-HSA-2512788)	0.556	3
UniProt:P52756 RBM5	1	RBM5 [nucleoplasm] (R-HSA-72049)	0.556	3
UniProt:P27958-PRO_0000037570			0.537	4
UniProt:P60033 CD81	1	CD81 [plasma membrane] (R-HSA-197933)	0.527	7
UniProt:Q9UBD9 CLCF1	1	CLCF1 [extracellular region] (R-HSA-5693175)	0.524	3
UniProt:Q9BQ95 ECSIT	2	ECSIT [cytosol] (R-HSA-168064) ECSIT [mitochondrial inner membrane] (R-HSA-5689047)	0.524	4
UniProt:Q16543 CDC37	1	CDC37 [cytosol] (R-HSA-1221609)	0.482	3
UniProt:P50502 ST13	1	ST13 [cytosol] (R-HSA-5255410)	0.482	3
UniProt:Q53EL6 PDCD4	1	PDCD4 [cytosol] (R-HSA-5432887)	0.482	3

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