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LIMS1 [cytosol]
Stable Identifier
R-HSA-432859
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
PINCH1, LIM and senescent cell antigen-like-containing domain protein 1, LIMS1_HUMAN
Locations in the PathwayBrowser for interactor UniProt:Q99708%20RBBP8
Expand all
Cell-Cell communication (Homo sapiens)
Cell junction organization (Homo sapiens)
Cell-extracellular matrix interactions (Homo sapiens)
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components (Homo sapiens)
Rsu-1 interacts with Pinch1 (Homo sapiens)
LIMS1 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:P48059 LIMS1
Gene Names
LIMS1, PINCH, PINCH1
Chain
initiator methionine:, chain:2-325
Reference Genes
BioGPS Gene:3987 LIMS1
COSMIC (genes):LIMS1 LIMS1
CTD Gene:3987 LIMS1
dbSNP Gene:3987 LIMS1
ENSEMBL:ENSG00000169756 LIMS1
ENSEMBL_homo_sapiens_GENE:ENSG00000169756.17 LIMS1
HGNC:6616 LIMS1
KEGG Gene (Homo sapiens):3987 LIMS1
Monarch:3987 LIMS1
NCBI Gene:3987 LIMS1
OMIM:602567 LIMS1
UCSC:P48059 LIMS1
Reference Transcript
RefSeq:NM_001193483.2 LIMS1
RefSeq:NM_001193484.1 LIMS1
RefSeq:NM_001193482.1 LIMS1
RefSeq:NM_001193485.2 LIMS1
RefSeq:NM_001193488.1 LIMS1
RefSeq:NM_004987.5 LIMS1
Other Identifiers
11741154_s_at
11741155_x_at
11745804_s_at
11747735_x_at
11760127_at
11760128_x_at
16901699
207198_PM_s_at
207198_s_at
212687_PM_at
212687_at
2499054
2499055
2499061
2499062
2499065
2499066
2499067
2499079
2499080
2499081
2499082
2499083
2499090
2499103
2499104
2499107
2499108
2499111
2499112
2499113
2499114
2499121
2499122
2499123
2499124
2499612
2499708
2499709
2499710
2499711
2499718
2499719
2499721
2499722
2499725
2499727
2499729
2499730
2499734
2570427
2570431
2570433
2570435
2570437
2570440
2570441
2570442
2570444
2570445
2570451
2570452
2570453
2570603
39232_at
3987
64027_at
64028_s_at
71957_at
8044258
8044333
8054519
A_14_P129225
A_23_P210358
A_33_P3268310
GE58901
GE63005
GE88586
GO:0005515
GO:0005737
GO:0005829
GO:0005886
GO:0005911
GO:0005925
GO:0006351
GO:0006355
GO:0007155
GO:0008270
GO:0010628
GO:0010811
GO:0016020
GO:0019901
GO:0023052
GO:0033209
GO:0034330
GO:0043123
GO:0043547
GO:0045184
GO:0045216
GO:0045892
GO:0046872
GO:0048471
GO:0051894
GO:0070161
GO:0071560
GO:0098609
GO:0110165
GO:1900026
GO:2001046
HMNXSV003053740
HMNXSV003056276
Hs.193700.0.S1_3p_at
ILMN_1656909
ILMN_1667738
ILMN_1675387
ILMN_1693665
ILMN_1733176
ILMN_2381037
PH_hs_0040144
TC02003487.hg
U09284_at
g13518025_3p_a_at
p33693
Participates
as a component of
Rsu-1:Pinch1 complex [cytosol] (Homo sapiens)
as an input of
Rsu-1 interacts with Pinch1 (Homo sapiens)
as a member of
PINCH [cytosol] (Homo sapiens)
as a candidate of
PINCH [cytosol] (Homo sapiens)
Inferred To
LIMS1 [cytosol]
(Bos taurus)
LIMS1 [cytosol]
(Canis familiaris)
LIMS1 [cytosol]
(Dictyostelium discoideum)
LIMS1 [cytosol]
(Gallus gallus)
LIMS1 [cytosol]
(Sus scrofa)
unc-97 [cytosol]
(Caenorhabditis elegans)
Lims1 [cytosol]
(Mus musculus)
Lims1 [cytosol]
(Rattus norvegicus)
stck [cytosol]
(Drosophila melanogaster)
Cross References
RefSeq
NP_004978.2
,
NP_001180412.1
,
NP_001180411.1
,
NP_001180417.1
,
NP_001180413.1
,
NP_001180414.1
OpenTargets
ENSG00000169756
GeneCards
P48059
HPA
ENSG00000169756-LIMS1
Ensembl
ENST00000409441
,
ENST00000410093
,
ENSP00000337598
,
ENST00000544547
,
ENSP00000437912
,
ENST00000338045
,
ENSP00000387264
,
ENSP00000331775
,
ENST00000393310
,
ENSP00000386926
,
ENST00000695518
,
ENSG00000169756
,
ENSP00000511981
,
ENSP00000376987
,
ENST00000695521
,
ENSP00000511984
,
ENST00000332345
PRO
P48059
Pharos - Targets
P48059
PDB
3F6Q
,
7D2T
,
4HI9
,
1U5S
,
2D8X
,
1G47
,
4HI8
,
1NYP
,
7D2S
,
7LT9
,
6MIF
,
2KBX
,
7D2U
,
2COR
Interactors (8)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q13418 ILK
1
ILK [cytosol]
(R-HSA-432864)
0.955
15
UniProt:Q15404 RSU1
1
RSU1 [cytosol]
(R-HSA-446297)
0.801
6
UniProt:O55222
1
ILK [cytosol]
(R-MMU-432864)
0.713
4
UniProt:O43639 NCK2
1
NCK2 [cytosol]
(R-HSA-204885)
0.623
2
UniProt:P09022 Hoxa1
1
Hoxa1 [nucleoplasm]
(R-MMU-5617924)
0.57
3
UniProt:Q99708 RBBP8
4
p-S327,T847-RBBP8 [nucleoplasm]
(R-HSA-5684083)
RBBP8 [nucleoplasm]
(R-HSA-912399)
Ac-K-RBBP8 [nucleoplasm]
(R-HSA-5685955)
p-S327,T847,T859-RBBP8 [nucleoplasm]
(R-HSA-5684138)
0.553
2
UniProt:Q9NVD7 PARVA
1
PARVA [cytosol]
(R-HSA-432848)
0.527
2
UniProt:Q9NS73 MBIP
1
MBIP [nucleoplasm]
(R-HSA-3662291)
0.488
2
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