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MBD3 [nucleoplasm]
Stable Identifier
R-HSA-4657010
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Methyl-CpG-binding domain protein 3, MBD3_HUMAN
Locations in the PathwayBrowser
Expand all
Chromatin organization (Homo sapiens)
Chromatin modifying enzymes (Homo sapiens)
HDACs deacetylate histones (Homo sapiens)
HDAC1:2-containing complex binds HDAC2 Inhibitors (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex:HDAC2 inhibitors [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex deacetylate histones (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex:HDAC2 inhibitors [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Developmental Biology (Homo sapiens)
Adipogenesis (Homo sapiens)
Transcriptional regulation of brown and beige adipocyte differentiation (Homo sapiens)
Transcriptional regulation of brown and beige adipocyte differentiation by EBF2 (Homo sapiens)
CIDEA gene expression is stimulated by EBF2 and PPARG and repressed by ZNF423 and NuRD (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
DIO2 gene expression is stimulated by EBF2 and repressed by ZNF423 (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
PPARA gene expression is stimulated by EBF2 and PPARG and repressed by ZNF423 and NuRD (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:PPARA gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
UCP1 gene expression is stimulated by EBF2 and PPARG and repressed by ZNF423 and NuRD (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:UCP1 gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
ZNF423 recruits NuRD to EBF2 target genes (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2,EBF2:Blnc1 lncRNA:HNRNPU:PPARA gene, UCP1 gene, (CIDEA gene, DIO2 gene) [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:CIDEA gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:DIO2 gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:PPARA gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:ZNF423:EBF2, EBF2:Blnc1 lncRNA:HNRNPU:UCP1 gene [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Disease (Homo sapiens)
Infectious disease (Homo sapiens)
Viral Infection Pathways (Homo sapiens)
SARS-CoV Infections (Homo sapiens)
Potential therapeutics for SARS (Homo sapiens)
HDAC1:2-containing complex binds HDAC2 Inhibitors (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex:HDAC2 inhibitors [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Positive epigenetic regulation of rRNA expression (Homo sapiens)
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression (Homo sapiens)
Recruitment of ERCC6 (CSB), EHMT2 (G9a), and NuRD to the promoter of rRNA gene (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
TTF-I:Sal Box:CSB:G9a:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
TTF1:rRNA promoter:ERCC6:EHMT2 complex dimethylates histone H3 at lysine-9 (Homo sapiens)
TTF-I:Sal Box:CSB:G9a:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Regulation of endogenous retroelements (Homo sapiens)
Regulation of endogenous retroelements by KRAB-ZFP proteins (Homo sapiens)
NuRD complex binds SUMO2-6K-TRIM28:KRAB-ZNF:retroelement (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
NuRD:SUMO2-6K-TRIM28:KRAB-ZNF:retroelement chromatin [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) (Homo sapiens)
DNMT3A:DNMT3L in nascent RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L methylates cytosine in DNA (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
PIWIL4:piRNA binds nascent LINE1 pre-RNA and recruits SPOCD1, C19ORF84, DNMT3A, DNMT3L, the NURD complex, and the BAF complex (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
RNA Polymerase I Transcription (Homo sapiens)
RNA Polymerase I Promoter Clearance (Homo sapiens)
RNA Polymerase I Transcription Initiation (Homo sapiens)
Recruitment of Acetylated SL1 to phosUBF-1:rDNA Promoter (Homo sapiens)
TTF-I:Sal Box:CSB:G9a:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional Regulation by TP53 (Homo sapiens)
Regulation of TP53 Activity (Homo sapiens)
Regulation of TP53 Activity through Acetylation (Homo sapiens)
MTA2-NuRD complex deacetylates TP53 (Homo sapiens)
MTA2-NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
Signal Transduction (Homo sapiens)
Intracellular signaling by second messengers (Homo sapiens)
PIP3 activates AKT signaling (Homo sapiens)
PTEN Regulation (Homo sapiens)
Regulation of PTEN gene transcription (Homo sapiens)
PTEN gene transcription is stimulated by TP53, EGR1, PPARG, ATF2, MAF1, and inhibited by NR2E1, SALL4, MECOM, SNAI1, SNAI2, JUN (Homo sapiens)
SALL4:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
SALL4:NuRD:PTEN gene [nucleoplasm] (Homo sapiens)
SALL4:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
SALL4 recruits NuRD to PTEN gene (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
SALL4:NuRD:PTEN gene [nucleoplasm] (Homo sapiens)
SALL4:NuRD [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
MBD3 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O95983 MBD3
Gene Names
MBD3
Chain
chain:1-291
Reference Genes
COSMIC (genes):MBD3 MBD3
dbSNP Gene:53615 MBD3
ENSEMBL:ENSG00000071655 MBD3
Participates
as a component of
MTA2-NuRD complex [nucleoplasm] (Homo sapiens)
NuRD complex [nucleoplasm] (Homo sapiens)
Inferred To
MBD3 [nucleoplasm]
(Bos taurus)
MBD3 [nucleoplasm]
(Canis familiaris)
MBD3 [nucleoplasm]
(Gallus gallus)
MBD3 [nucleoplasm]
(Sus scrofa)
MBD-like [nucleoplasm]
(Drosophila melanogaster)
Mbd3 [nucleoplasm]
(Mus musculus)
Mbd3 [nucleoplasm]
(Rattus norvegicus)
Ghost homologue of MBD3 [nucleoplasm]
(Caenorhabditis elegans)
mbd3 [nucleoplasm]
(Xenopus tropicalis)
Interactors (21)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q13547 HDAC1
2
HDAC1 [nucleoplasm]
(R-HSA-205021)
monoSUMO1-K444,K476-HDAC1 [nucleoplasm]
(R-HSA-4616030)
0.899
10
UniProt:Q92769 HDAC2
2
HDAC2 [nucleoplasm]
(R-HSA-205135)
monoSUMO1-K462-HDAC2 [nucleoplasm]
(R-HSA-4615958)
0.812
6
UniProt:Q09028 RBBP4
1
RBBP4 [nucleoplasm]
(R-HSA-212223)
0.812
8
UniProt:Q16576 RBBP7
1
RBBP7 [nucleoplasm]
(R-HSA-212227)
0.758
7
UniProt:Q13330 MTA1
2
MTA1 [nucleoplasm]
(R-HSA-3465550)
polySUMO2,3-K509-MTA1 [nucleoplasm]
(R-HSA-3465537)
0.597
3
UniProt:Q14839 CHD4
1
CHD4 [nucleoplasm]
(R-HSA-3702078)
0.597
4
UniProt:Q12873 CHD3
2
CHD3 [nucleoplasm]
(R-HSA-4657012)
monoSUMO1-K1971-CHD3 [nucleoplasm]
(R-HSA-8956372)
0.597
4
UniProt:O00560 SDCBP
3
SDCBP [cytosol]
(R-HSA-373639)
SDCBP [azurophil granule lumen]
(R-HSA-6799372)
SDCBP [extracellular region]
(R-HSA-6806206)
0.556
3
UniProt:Q08379 GOLGA2
3
p-S37-GOLGA2 [Golgi membrane]
(R-HSA-2172179)
GOLGA2 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-HSA-2167933)
GOLGA2 [Golgi membrane]
(R-HSA-6808764)
0.556
3
UniProt:O60341 KDM1A
1
KDM1A [nucleoplasm]
(R-HSA-996769)
0.547
4
UniProt:P52294 KPNA1
2
KPNA1 [cytosol]
(R-HSA-180612)
KPNA1 [nucleoplasm]
(R-HSA-188865)
0.527
2
UniProt:P14404 Mecom
1
Mecom [nucleoplasm]
(R-MMU-9830485)
0.527
2
UniProt:Q9UJQ4 SALL4
1
SALL4 [nucleoplasm]
(R-HSA-452644)
0.527
3
UniProt:P52292 KPNA2
2
KPNA2 [cytosol]
(R-HSA-205976)
KPNA2 [nucleoplasm]
(R-HSA-206045)
0.527
2
UniProt:Q01860 POU5F1 (OCT4)
1
POU5F1 [nucleoplasm]
(R-HSA-452472)
0.499
3
UniProt:O43474 KLF4
1
KLF4 [nucleoplasm]
(R-HSA-434463)
0.499
3
UniProt:P48431 SOX2
1
SOX2 [nucleoplasm]
(R-HSA-452271)
0.499
3
UniProt:P01106 MYC
2
MYC [nucleoplasm]
(R-HSA-188379)
PolyUb-MYC [nucleoplasm]
(R-HSA-6783169)
0.499
3
UniProt:Q96KQ7 EHMT2
1
EHMT2 [nucleoplasm]
(R-HSA-212151)
0.462
4
UniProt:P23771 GATA3
2
GATA3 [nucleoplasm]
(R-HSA-996768)
PolyUb-GATA3 [nucleoplasm]
(R-HSA-6783009)
0.462
4
UniProt:O60315 ZEB2
1
ZEB2 [nucleoplasm]
(R-HSA-3108222)
0.462
5
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