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NCBP2 [nucleoplasm]
Stable Identifier
R-HSA-51463
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
CBP20, 20 kDa nuclear cap binding protein (NCBP 20 kDa subunit) (CBP20) (NCBP interacting protein 1) (NIP1), 20 kDa nuclear cap binding protein, NCBP 20 kDa subunit, NCBP interacting protein 1, NIP1
Icon
Locations in the PathwayBrowser for interactor UniProt:Q8WX92%20NELFB
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNAs Derived from Intronless Transcripts (Homo sapiens)
Transport of the SLBP Dependant Mature mRNA (Homo sapiens)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Homo sapiens)
NCBP2 [nucleoplasm] (Homo sapiens)
mRNA Capping (Homo sapiens)
Formation of cap binding complex (CBC) (Homo sapiens)
NCBP2 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P52298 NCBP2
Gene Names
NCBP2, CBP20, PIG55
Chain
initiator methionine:, chain:2-156
Reference Genes
BioGPS Gene:22916 NCBP2
COSMIC (genes):NCBP2 NCBP2
CTD Gene:22916 NCBP2
dbSNP Gene:22916 NCBP2
ENSEMBL:ENSG00000114503 NCBP2
ENSEMBL_homo_sapiens_GENE:ENSG00000114503.11 NCBP2
HGNC:7659 NCBP2
KEGG Gene (Homo sapiens):22916 NCBP2
Monarch:22916 NCBP2
NCBI Gene:22916 NCBP2
OMIM:605133 NCBP2
UCSC:P52298 NCBP2
Reference Transcript
RefSeq:NM_007362.3 NCBP2
RefSeq:NM_001308036.1 NCBP2
RefSeq:NM_001042540.1 NCBP2
Other Identifiers
11715960_x_at
11740054_s_at
11747323_x_at
11747324_s_at
11751520_x_at
16963402
201517_PM_at
201517_at
201521_PM_s_at
201521_s_at
22916
2713071
2713073
2713075
2713076
2713077
2713078
2713080
2713083
2713084
2713087
2713088
2713089
2713090
2713091
2713092
2713093
32789_at
32790_at
8093156
A_23_P155316
A_24_P157424
D59253_at
GE479851
GE87887
GO:0000184
GO:0000339
GO:0000340
GO:0000380
GO:0000398
GO:0002181
GO:0002191
GO:0003676
GO:0003677
GO:0003723
GO:0003729
GO:0005515
GO:0005634
GO:0005654
GO:0005737
GO:0005829
GO:0005845
GO:0005846
GO:0006351
GO:0006355
GO:0006397
GO:0006406
GO:0006408
GO:0006417
GO:0006446
GO:0006913
GO:0008334
GO:0008380
GO:0016071
GO:0017069
GO:0031047
GO:0031053
GO:0031124
GO:0031442
GO:0032968
GO:0034518
GO:0035194
GO:0035195
GO:0042789
GO:0043226
GO:0045292
GO:0046833
GO:0051028
HMNXSV003026916
ILMN_1720442
ILMN_2412564
PH_hs_0012927
g12654824_3p_at
g6679063_3p_a_at
Participates
as a component of
upstream mRNA fragment:CPSF:PAP:PABPN1 complex [nucleoplasm] (Homo sapiens)
capped intronless pre-mRNA:CBC complex [nucleoplasm] (Homo sapiens)
Mature Intronless transcript derived Histone mRNA:SLBP:CBP80:CBP20 [nucleoplasm] (Homo sapiens)
Cap Binding Complex (CBC) [nucleoplasm] (Homo sapiens)
as an output of
Docking of Mature Replication Dependent Histone mRNA with the NPC (Homo sapiens)
as an input of
Formation of cap binding complex (CBC) (Homo sapiens)
Other forms of this molecule
NCBP2 [cytosol]
Inferred To
NCBP2 [nucleoplasm]
(Bos taurus)
NCBP2 [nucleoplasm]
(Caenorhabditis elegans)
NCBP2 [nucleoplasm]
(Canis familiaris)
NCBP2 [nucleoplasm]
(Danio rerio)
NCBP2 [nucleoplasm]
(Dictyostelium discoideum)
NCBP2 [nucleoplasm]
(Drosophila melanogaster)
NCBP2 [nucleoplasm]
(Gallus gallus)
NCBP2 [nucleoplasm]
(Mus musculus)
NCBP2 [nucleoplasm]
(Plasmodium falciparum)
NCBP2 [nucleoplasm]
(Rattus norvegicus)
NCBP2 [nucleoplasm]
(Saccharomyces cerevisiae)
NCBP2 [nucleoplasm]
(Schizosaccharomyces pombe)
NCBP2 [nucleoplasm]
(Sus scrofa)
NCBP2 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_001036005.1
,
NP_001294965.1
,
NP_031388.2
OpenTargets
ENSG00000114503
GeneCards
P52298
HPA
ENSG00000114503-NCBP2
Ensembl
ENSP00000326806
,
ENSG00000114503
,
ENST00000452404
,
ENST00000321256
,
ENSP00000397619
,
ENSP00000412785
,
ENST00000427641
PRO
P52298
Pharos - Targets
P52298
PDB
5OO6
,
1N54
,
1N52
,
1H2V
,
1H6K
,
1H2U
,
1H2T
,
5OOB
,
7ABG
,
6D0Y
,
3FEX
,
3FEY
Interactors (22)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q09161 NCBP1
2
NCBP1 [nucleoplasm]
(R-HSA-51469)
NCBP1 [cytosol]
(R-HSA-162459)
0.965
54
UniProt:Q9H814 PHAX
2
PHAX [cytosol]
(R-HSA-191804)
PHAX [nucleoplasm]
(R-HSA-191803)
0.725
10
ChEBI:50210 7-METHYL-GTP
0.688
13
UniProt:Q6NZY4 ZCHC8
0.643
3
UniProt:Q86VM9 ZCH18
0.643
6
UniProt:P18615 NELFE
2
p-NELFE [nucleoplasm]
(R-HSA-170698)
NELFE [nucleoplasm]
(R-HSA-62907)
0.643
4
UniProt:O00505 KPNA3
2
KPNA3 [nucleoplasm]
(R-HSA-1176061)
KPNA3 [cytosol]
(R-HSA-1176070)
0.643
9
UniProt:Q9BXP5 SRRT
1
SRRT [nucleoplasm]
(R-HSA-6814858)
0.643
8
UniProt:P52292 KPNA2
2
KPNA2 [nucleoplasm]
(R-HSA-206045)
KPNA2 [cytosol]
(R-HSA-205976)
0.643
6
UniProt:P52294 KPNA1
2
KPNA1 [cytosol]
(R-HSA-180612)
KPNA1 [nucleoplasm]
(R-HSA-188865)
0.643
3
UniProt:Q9BRK4 LZTS2
0.556
3
UniProt:Q9Y580 RBM7
1
RBM7 [nucleoplasm]
(R-HSA-8985564)
0.527
2
UniProt:Q8WX92 NELFB
3
NELFB [mitochondrial outer membrane]
(R-HSA-9603553)
NELFB [cytosol]
(R-HSA-9603526)
NELFB [nucleoplasm]
(R-HSA-112427)
0.527
3
UniProt:P42285 SKIV2L2
1
SKIV2L2 [nucleoplasm]
(R-HSA-6791189)
0.527
4
UniProt:P38919 EIF4A3
2
EIF4A3 [nucleoplasm]
(R-HSA-8849149)
EIF4A3 [cytosol]
(R-HSA-927868)
0.527
5
UniProt:O00629 KPNA4
2
KPNA4 [cytosol]
(R-HSA-1176066)
KPNA4 [nucleoplasm]
(R-HSA-1176058)
0.527
2
UniProt:Q9Y5S9 RBM8A
2
RBM8A [cytosol]
(R-HSA-162462)
RBM8A [nucleoplasm]
(R-HSA-156659)
0.527
2
UniProt:Q53F19 NCBP3
0.527
4
UniProt:O60684 KPNA6
2
KPNA6 [nucleoplasm]
(R-HSA-9734665)
KPNA6 [cytosol]
(R-HSA-9734672)
0.527
2
UniProt:Q92900 UPF1
2
UPF1 [cytosol]
(R-HSA-927734)
p-4S-UPF1 [cytosol]
(R-HSA-927856)
0.527
3
UniProt:Q9NWB6 ARGL1
0.483
2
UniProt:P27824 CANX
2
CANX [integral component of lumenal side of endoplasmic reticulum membrane]
(R-HSA-983091)
CANX [endoplasmic reticulum lumen]
(R-HSA-195906)
0.483
2
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