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TDRKH [cytosol]
Stable Identifier
R-HSA-5608255
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Tudor and KH domain-containing protein, TDRKH_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
Gene Silencing by RNA (Homo sapiens)
PIWI-interacting RNA (piRNA) biogenesis (Homo sapiens)
Complexed PIWIL1 binds pre-piRNA (Homo sapiens)
4xMeR-PIWIL1:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:pre-piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
Complexed PIWIL4 binds cleaved transposon RNA (Homo sapiens)
MeR-PIWIL4:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:cleaved transposon RNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
HENMT1 methylates 2' hydroxyl at 3' end of piRNA in 4xMeR-PIWIL1:piRNA:TDRD6:TDRKH (Homo sapiens)
4xMeR-PIWIL1:2'-O-methyl-piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
HENMT1 methylates 2' hydroxyl at 3' end of piRNA in MeR-PIWIL4:piRNA:TDRD9:MAEL:TDRKH (Homo sapiens)
MeR-PIWIL4:2'-O-methyl-piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:2'-O-methyl-piRNA:TDRD9:MAEL:TDRKH dissociates and MeR-PIWIL4:2'-O-methylpiRNA, TDRD9, MAEL translocate from cytosol to nucleus in an unknown association and order of events (Homo sapiens)
MeR-PIWIL4:2'-O-methyl-piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
Unknown nuclease cleaves cleaved transposon RNA bound in MeR-PIWIL4:cleaved transposon RNA:TDRD9:MAEL:TDRKH (Homo sapiens)
MeR-PIWIL4:cleaved transposon RNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
Unknown nuclease cleaves pre-piRNA in 4xMeR-PIWIL1:pre-piRNA:TDRD6:TDRKH (Homo sapiens)
4xMeR-PIWIL1:piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:pre-piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
TDRKH [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y2W6 TDRKH
Gene Names
TDRKH, TDRD2
Chain
chain:1-561
Reference Genes
BioGPS Gene:11022 TDRKH
COSMIC (genes):TDRKH TDRKH
CTD Gene:11022 TDRKH
dbSNP Gene:11022 TDRKH
ENSEMBL:ENSG00000182134 TDRKH
ENSEMBL_homo_sapiens_GENE:ENSG00000182134.17 TDRKH
HGNC:11713 TDRKH
KEGG Gene (Homo sapiens):11022 TDRKH
Monarch:11022 TDRKH
NCBI Gene:11022 TDRKH
OMIM:609501 TDRKH
UCSC:Q9Y2W6 TDRKH
Reference Transcript
RefSeq:NM_001083964.1 TDRKH
RefSeq:XM_017000125.1 TDRKH
RefSeq:NM_001083965.1 TDRKH
RefSeq:XM_017000122.1 TDRKH
RefSeq:XM_017000126.1 TDRKH
RefSeq:XM_017000127.1 TDRKH
RefSeq:NM_006862.3 TDRKH
RefSeq:XM_017000123.1 TDRKH
RefSeq:NM_001083963.1 TDRKH
RefSeq:XM_017000124.1 TDRKH
Other Identifiers
11022
11715176_at
11715177_s_at
16693187
221052_PM_at
221052_at
221053_PM_s_at
221053_s_at
223530_PM_at
223530_at
2435220
2435221
2435223
2435224
2435225
2435226
2435227
2435228
2435229
2435230
2435231
2435232
2435233
2435234
2435238
2435240
2435241
2435242
2435243
2435244
2435246
2435247
2435248
2435249
2435250
7920057
79708_at
89904_at
A_24_P41975
GE54986
GO:0003676
GO:0003723
GO:0005515
GO:0005737
GO:0005739
GO:0007140
GO:0007283
GO:0009566
GO:0022414
GO:0030154
GO:0030719
GO:0031047
GO:0034587
GO:0043186
GO:0043226
GO:0048856
GO:0071546
GO:0071547
GO:0110165
GO:0140013
HMNXSV003047938
HMNXSV003048046
ILMN_1792726
PH_hs_0008540
PH_hs_0035600
TC01003229.hg
g6755759_3p_at
g7109257_3p_at
Participates
as an output of
MeR-PIWIL4:2'-O-methyl-piRNA:TDRD9:MAEL:TDRKH dissociates and MeR-PIWIL4:2'-O-methylpiRNA, TDRD9, MAEL translocate from cytosol to nucleus in an unknown association and order of events (Homo sapiens)
as a component of
4xMeR-PIWIL1:TDRD6:TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:pre-piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:2'-O-methyl-piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
4xMeR-PIWIL1:piRNA:TDRD6:TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:cleaved transposon RNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:2'-O-methyl-piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
MeR-PIWIL4:piRNA:TDRD9:MAEL:TDRKH [cytosol] (Homo sapiens)
Cross References
RefSeq
XP_016855616.1
,
NP_001077434.1
,
XP_016855615.1
,
NP_006853.2
,
XP_016855614.1
,
XP_016855611.1
,
XP_016855612.1
,
NP_001077432.1
,
NP_001077433.1
,
XP_016855613.1
OpenTargets
ENSG00000182134
HPA
ENSG00000182134-TDRKH
GeneCards
Q9Y2W6
Ensembl
ENST00000458431
,
ENST00000368822
,
ENST00000368825
,
ENSG00000182134
,
ENSP00000357815
,
ENSP00000395718
,
ENSP00000357817
,
ENST00000368824
,
ENST00000368827
,
ENSP00000357812
,
ENSP00000357819
PRO
Q9Y2W6
Pharos - Targets
Q9Y2W6
PDB
5J39
,
3FDR
,
6PI7
,
2DIQ
,
6B57
Interactors (5)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:B3EWG5 FM25C
0.556
3
UniProt:Q8TF47 ZFP90
1
ZFP90 [nucleoplasm]
(R-HSA-974988)
0.556
3
UniProt:Q9BV90 SNRNP25
1
SNRNP25 [nucleoplasm]
(R-HSA-6787847)
0.556
3
UniProt:Q9NS86 LANC2
0.556
3
UniProt:Q8NCN2 ZBT34
0.556
3
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