Reactome | USP47 [nucleoplasm]

USP47 [nucleoplasm]

Stable Identifier

R-HSA-5696961

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

Ubiquitin carboxyl-terminal hydrolase 47 ecNumber3.4.19.12/ecNumber, UBP47_HUMAN

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q96K76 USP47

Gene Names

USP47

Chain

chain:1-1375

Reference Genes

BioGPS Gene:55031 USP47

COSMIC (genes):USP47 USP47

CTD Gene:55031 USP47

dbSNP Gene:55031 USP47

ENSEMBL:ENSG00000170242 USP47

HGNC:20076 USP47

KEGG:hsa:55031 USP47

Monarch:55031 USP47

NCBI Gene:55031 USP47

OMIM:614460 USP47

UCSC:Q96K76 USP47

Reference Transcript

Other Identifiers

11743614_a_at

11743615_s_at

11743616_a_at

11753990_a_at

11761963_at

11761964_at

16722032

221126_PM_at

221126_at

221127_PM_s_at

221127_s_at

221518_PM_s_at

221518_s_at

223117_PM_s_at

223117_s_at

223118_PM_s_at

223118_s_at

223119_PM_s_at

223119_s_at

223701_PM_s_at

223701_s_at

31454_f_at

3320605

3320606

3320612

3320613

3320614

3320615

3320616

3320617

3320618

3320619

3320620

3320621

3320622

3320625

3320626

3320627

3320629

3320630

3320631

3320634

3320635

3320637

3320638

3320639

3320640

3320642

3320643

3320644

3320645

3320647

3320648

3320649

3320650

3320651

3320652

3320653

3320654

3320655

3320656

3320659

3320660

3320662

3320663

3320664

3320665

3320666

3320667

3320668

3320669

3320670

3320676

3320677

3320678

3320680

43383_s_at

52550_s_at

53928_at

55031

60436_at

63880_at

70055_at

78073_at

7938448

7938481

A_14_P104892

A_14_P110028

A_14_P113961

A_14_P116603

A_14_P117308

A_14_P135080

A_23_P113380

A_23_P36248

A_23_P363149

A_24_P218620

A_32_P114246

A_33_P3308706

GE476703

GE725367

GE82255

GE87396

GO:0003824

GO:0004843

GO:0005515

GO:0005634

GO:0005654

GO:0005737

GO:0005829

GO:0006281

GO:0006284

GO:0006355

GO:0006508

GO:0006974

GO:0008234

GO:0008630

GO:0009410

GO:0010972

GO:0016579

GO:0016787

GO:0019005

GO:0030307

GO:0034644

GO:0035520

GO:0043066

GO:0043154

GO:0043226

GO:0045892

GO:0071987

GO:0090263

GO:0101005

GO:0140096

GO:1902230

HMNXSV003046770

Hs.300700.1.S1_3p_a_at

Hs.300700.1.S2_3p_a_at

Hs.300700.1.S3_3p_a_at

ILMN_1653786

ILMN_1722953

ILMN_1789790

PH_hs_0025824

TC11000194.hg

U32331_at

g12001943_3p_a_at

g12652938_3p_a_at

g5454007_3p_at

Participates

as a component of

Inferred To

USP47 [nucleoplasm] (Bos taurus)

USP47 [nucleoplasm] (Canis familiaris)

USP47 [nucleoplasm] (Sus scrofa)

usp47 [nucleoplasm] (Xenopus tropicalis)

Usp47 [nucleoplasm] (Mus musculus)

Usp47 [nucleoplasm] (Rattus norvegicus)

Cross References

ENSEMBL

ENSP00000382382, ENSP00000433146, ENST00000399455, ENST00000527733, ENSP00000339957, ENSG00000170242, ENST00000339865

OpenTargets

ENSG00000170242

GeneCards

USP47

HPA

ENSG00000170242-USP47

ZINC - Substances

UBP47_HUMAN

ZINC target

Q96K76

PRO

Q96K76

Pharos - Targets

Q96K76

GlyGen

Q96K76

ZINC - Predictions - Purchasable

UBP47_HUMAN

HMDB Protein

HMDBP10116

Interactors (11)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P52198 RND2	1	RND2 [plasma membrane] (R-HSA-9696269)	0.589	3
UniProt:Q9H668 STN1	1	STN1 [nucleoplasm] (R-HSA-9668821)	0.527	2
UniProt:Q15836 VAMP3	6	VAMP3 [recycling endosome membrane] (R-HSA-2029063) VAMP3 [phagocytic vesicle membrane] (R-HSA-2029013) VAMP3 [plasma membrane] (R-HSA-8867599) VAMP3 [trans-Golgi network membrane] (R-HSA-6814624) VAMP3 [transport vesicle] (R-HSA-6814625) VAMP3 [clathrin-coated endocytic vesicle membrane] (R-HSA-8869130)	0.527	2
UniProt:P62495 ETF1	3	ETF1 [cytosol] (R-HSA-54433) 4OHK63-ETF1 [cytosol] (R-HSA-9629948) Me-Q185-ETF1 [cytosol] (R-HSA-6800157)	0.527	2
UniProt:O60216 RAD21	14	RAD21 [nucleoplasm] (R-HSA-163042) RAD21 [chromosome, centromeric region] (R-HSA-2466012) RAD21 [chromosome] (R-HSA-1638775) p-S454-RAD21 [cytosol] (R-HSA-2500310) p-S454-RAD21 [chromosome] (R-HSA-2485164) p-S454-RAD21 [chromosome, centromeric region] (R-HSA-2485163) RAD21(1-172) [chromosome, centromeric region] (R-HSA-2467793) p-S454-RAD21(451-631) [chromosome, centromeric region] (R-HSA-2467790) RAD21(173-450) [chromosome, centromeric region] (R-HSA-2500296) RAD21(1-172) [cytosol] (R-HSA-2484901) RAD21(173-450) [cytosol] (R-HSA-2500308) p-S454-RAD21(451-631) [cytosol] (R-HSA-2500309) RAD21 [cytosol] (R-HSA-2484795) monoSUMO1-K-RAD21 [nucleoplasm] (R-HSA-3108183)	0.527	2
UniProt:O43776 NARS1	1	NARS [cytosol] (R-HSA-379625)	0.527	2
UniProt:P39748 FEN1	1	FEN1 [nucleoplasm] (R-HSA-54745)	0.527	2
UniProt:O14965 AURKA	6	p-T288-AURKA [cytosol] (R-HSA-2574832) AURKA [cytosol] (R-HSA-174254) p-T288-AURKA [nucleoplasm] (R-HSA-6805089) PolyUb-AURKA [cytosol] (R-HSA-8854040) AURKA [nucleoplasm] (R-HSA-4655443) SUMO1-K258-AURKA [cytosol] (R-HSA-4655367)	0.527	3
UniProt:Q15738 NSDHL	1	NSDHL [endoplasmic reticulum membrane] (R-HSA-194707)	0.527	2
UniProt:Q00341 HDLBP	1	HDLBP [plasma membrane] (R-HSA-8858026)	0.527	2
UniProt:Q9Y297 BTRC	2	BTRC [cytosol] (R-HSA-174237) BTRC [nucleoplasm] (R-HSA-3361753)	0.527	4