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XAB2 [nucleoplasm]
Stable Identifier
R-HSA-67411
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
XPA-binding protein 2, HCNP protein, PP3898
Locations in the PathwayBrowser for interactor UniProt:O60306 AQR
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B Complex (Homo sapiens)
XAB2 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9HCS7 XAB2
Gene Names
XAB2, HCNP, KIAA1177, SYF1, PP3898
Chain
chain:1-855
Reference Genes
BioGPS Gene:56949 XAB2
COSMIC (genes):XAB2 XAB2
CTD Gene:56949 XAB2
dbSNP Gene:56949 XAB2
ENSEMBL:ENSG00000076924 XAB2
HGNC:14089 XAB2
KEGG Gene (Homo sapiens):56949 XAB2
Monarch:56949 XAB2
NCBI Gene:56949 XAB2
OMIM:610850 XAB2
UCSC:Q9HCS7 XAB2
Reference Transcript
RefSeq:NM_020196.2 XAB2
Other Identifiers
0002260142
11757909_a_at
16867948
218110_at
3848443
3848444
3848446
3848447
3848448
3848450
3848451
3848453
3848455
3848456
3848458
3848461
3848464
3848465
3848466
3848469
3848471
3848473
3848476
3848477
3848478
3848479
47620_at
48751
56949
5MQF
5XJC
5YZG
5Z56
5Z57
6FF7
6ICZ
6ID0
6ID1
6QDV
8033392
A_23_P142013
A_24_P2093
AAF86951
AAG23770
AAH07208
AAH08778
AAN17847
AB026111
AB033003
AF226051
AF258567
AF547265
AK074035
BAA86491
BAB15807
BAB84861
BC007208
BC008778
CCDS32892
ENSG00000076924
ENSP00000351137
ENST00000358368
ENST00000358368.4
EntrezGene:56949
EntrezGene:XAB2
g9910259_3p_at
GE53813
GO:0000349
GO:0000398
GO:0000974
GO:0001824
GO:0003674
GO:0005515
GO:0005575
GO:0005622
GO:0005623
GO:0005634
GO:0005654
GO:0005681
GO:0006259
GO:0006281
GO:0006283
GO:0006351
GO:0006396
GO:0006397
GO:0006950
GO:0006974
GO:0008150
GO:0008380
GO:0009058
GO:0009790
GO:0016020
GO:0021987
GO:0022607
GO:0022618
GO:0032991
GO:0034641
GO:0043226
GO:0048856
GO:0065003
GO:0071007
GO:0071013
GO:0071014
HGNC:14089
HPA048751
ILMN_1771057
IPR003107
IPR011990
IPR013026
IPR019734
MIM:610850
NM_020196
NP_064581
PF13181
PH_hs_0001015
SM00028
SM00386
TC19001114.hg
UPI0000001BDE
XAB2
XAB2-201
Participant Of
input
Formation of the Spliceosomal B Complex
hasComponent
intron-containing complex [nucleoplasm]
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm]
Spliceosomal Active C (B*) Complex [nucleoplasm]
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm]
Spliceosomal B Complex [nucleoplasm]
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm]
XAB2 complex [nucleoplasm]
Inferred To
Ghost homologue of XAB2 [nucleoplasm] (Gallus gallus)
XAB2 [nucleoplasm] (Bos taurus)
XAB2 [nucleoplasm] (Caenorhabditis elegans)
XAB2 [nucleoplasm] (Canis familiaris)
XAB2 [nucleoplasm] (Danio rerio)
XAB2 [nucleoplasm] (Dictyostelium discoideum)
XAB2 [nucleoplasm] (Drosophila melanogaster)
XAB2 [nucleoplasm] (Mus musculus)
XAB2 [nucleoplasm] (Plasmodium falciparum)
XAB2 [nucleoplasm] (Rattus norvegicus)
XAB2 [nucleoplasm] (Saccharomyces cerevisiae)
XAB2 [nucleoplasm] (Schizosaccharomyces pombe)
XAB2 [nucleoplasm] (Sus scrofa)
XAB2 [nucleoplasm] (Xenopus tropicalis)
Cross References
RefSeq
NP_064581.2
OpenTargets
ENSG00000076924
GeneCards
Q9HCS7
PRO
Q9HCS7
PDB
6FF7
,
5XJC
,
5MQF
,
6ICZ
,
5Z57
,
6ID0
,
5YZG
,
5Z56
,
6QDV
,
6ID1
Interactors (13)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9UNP9 PPIE
4
PPIE [ficolin-1-rich granule lumen]
(R-HSA-6801393)
PPIE [nucleoplasm]
(R-HSA-6781959)
PPIE [extracellular region]
(R-HSA-6806493)
PPIE [secretory granule lumen]
(R-HSA-6801369)
0.834
10
UniProt:Q9ULR0 ISY1
1
ISY1 [nucleoplasm]
(R-HSA-6781963)
0.675
6
UniProt:O60306 AQR
1
AQR [nucleoplasm]
(R-HSA-6781960)
0.659
5
UniProt:P09661 SNRPA1
1
SNRPA1 [nucleoplasm]
(R-HSA-71958)
0.59
2
UniProt:Q9CSN1 Snw1
1
Snw1 [nucleoplasm]
(R-MMU-2065315)
0.564
2
UniProt:Q13216 ERCC8
1
ERCC8 [nucleoplasm]
(R-HSA-52835)
0.524
3
UniProt:P23025 XPA
1
XPA [nucleoplasm]
(R-HSA-67437)
0.508
2
UniProt:Q13123 RED
0.508
2
UniProt:Q13573 SNW1
1
SNW1 [nucleoplasm]
(R-HSA-351663)
0.508
2
UniProt:O60231 DHX16
1
DHX16 [nucleoplasm]
(R-HSA-8850837)
0.508
2
UniProt:Q13435 SF3B2
1
SF3B2 [nucleoplasm]
(R-HSA-71971)
0.508
2
UniProt:Q03468 ERCC6
2
ERCC6 [nucleoplasm]
(R-HSA-54429)
Ub-ERCC6 [nucleoplasm]
(R-HSA-6781853)
0.499
2
UniProt:Q49A26-4 GLYR1
0.488
2
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