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RNPC3 [nucleoplasm]
Stable Identifier
R-HSA-6787844
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
RNA-binding protein 40, RBM40_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Minor Pathway (Homo sapiens)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
Formation of AT-AC A complex (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
Formation of AT-AC B Complex (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
Formation of AT-AC C complex (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U12 snRNP [nucleoplasm] (Homo sapiens)
RNPC3 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q96LT9 RNPC3
Gene Names
RNPC3, KIAA1839, RBM40, RNP, SNRNP65
Chain
chain:1-517
Reference Genes
BioGPS Gene:55599 RNPC3
COSMIC (genes):RNPC3 RNPC3
CTD Gene:55599 RNPC3
dbSNP Gene:55599 RNPC3
ENSEMBL:ENSG00000185946 RNPC3
HGNC:18666 RNPC3
Monarch:55599 RNPC3
NCBI Gene:55599 RNPC3
OMIM:618016 RNPC3
UCSC:Q96LT9 RNPC3
Reference Transcript
RefSeq:NM_017619.3 RNPC3
Other Identifiers
11728987_a_at
11746457_a_at
11758354_s_at
16667801
226975_PM_at
226975_at
226999_3p_at
226999_PM_at
226999_at
228023_PM_x_at
228023_x_at
229903_PM_x_at
229903_x_at
2349352
2349353
2349354
2349355
2349358
2349363
2349364
2349365
2349366
2349368
2349369
2349370
2349371
2349372
2349373
2349374
2349375
2349376
2349377
2349378
2349380
2349381
2349382
2349383
2349384
2349385
2349386
2349387
2349388
2349389
2349390
2349391
2349393
2349395
2349397
2349398
2681576
2681577
2681579
2681581
2681584
2681586
55599
65433_at
65496_at
78560_at
7903404
7903407
85252_at
A_14_P126079
A_14_P127777
A_14_P200815
A_23_P254967
A_23_P254970
A_24_P341504
A_24_P344890
A_33_P3283626
A_33_P3339066
GE84547
GO:0000398
GO:0003676
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005689
GO:0006397
GO:0008380
GO:0016071
GO:0030626
GO:0043226
GO:0097157
HMNXSV003002980
HMNXSV003011493
Hs.14235.0.S1_3p_at
Hs.14235.0.S2_3p_x_at
Hs.278399.1.S1_3p_s_at
Hs.278399.1.S1_3p_x_at
Hs.278399.2.S1_3p_s_at
Hs.278399.2.S1_3p_x_at
ILMN_1766542
ILMN_1783026
ILMN_2150284
PH_hs_0040940
TC01004581.hg
Participates
as a component of
U12 snRNP [nucleoplasm] (Homo sapiens)
Inferred To
RNPC3 [nucleoplasm]
(Bos taurus)
RNPC3 [nucleoplasm]
(Canis familiaris)
RNPC3 [nucleoplasm]
(Gallus gallus)
RNPC3 [nucleoplasm]
(Sus scrofa)
rnpc3 [nucleoplasm]
(Xenopus tropicalis)
Ghost homologue of RNPC3 [nucleoplasm]
(Caenorhabditis elegans)
65K [nucleoplasm]
(Drosophila melanogaster)
Rnpc3 [nucleoplasm]
(Mus musculus)
Rnpc3 [nucleoplasm]
(Rattus norvegicus)
Cross References
ENSEMBL
ENST00000524631
,
ENST00000533099
,
ENST00000423855
,
ENSP00000432886
,
ENSP00000391432
,
ENSP00000437278
OpenTargets
ENSG00000185946
HPA
ENSG00000185946-RNPC3
PRO
Q96LT9
Pharos - Targets
Q96LT9
GlyGen
Q96LT9
Orphanet
RNPC3
PDB
3EGN
,
5OBN
Interactors (5)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62306 SNRPF
2
SNRPF [cytosol]
(R-HSA-191852)
SNRPF [nucleoplasm]
(R-HSA-71907)
0.643
4
UniProt:Q8TBF4 ZCRB1
2
ZCRB1 [cytosol]
(R-HSA-9682010)
ZCRB1 [nucleoplasm]
(R-HSA-6787853)
0.527
3
UniProt:P62304 SNRPE
2
SNRPE [cytosol]
(R-HSA-191782)
SNRPE [nucleoplasm]
(R-HSA-71905)
0.527
4
UniProt:Q15696 ZRSR2
1
ZRSR2 [nucleoplasm]
(R-HSA-8865914)
0.527
4
UniProt:P14678 SNRPB
4
2xMe-SNRPB [cytosol]
(R-HSA-192218)
SNRPB [cytosol]
(R-HSA-191798)
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [nucleoplasm]
(R-HSA-71896)
0.527
2
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