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RRP9 [nucleoplasm]
Stable Identifier
R-HSA-6790682
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U3 small nucleolar RNA-interacting protein 2, U3IP2_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
Major pathway of rRNA processing in the nucleolus and cytosol (Homo sapiens)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Homo sapiens)
18SE pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
30S pre-rRNA is nucleolytically processed at site 1 to yield 21S pre-rRNA (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
45S pre-rRNA is nucleolytically processed at site 2 (site 2b) to yield 30S pre-rRNA and 32S pre-rRNA (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
47S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
EMG1 of the SSU processome methylates pseudouridine-1248 of 18S rRNA yielding N(1)-methylpseudouridine-1248 (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
U3 snoRNP [nucleoplasm] (Homo sapiens)
RRP9 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O43818 RRP9
Gene Names
RRP9, RNU3IP2, U355K
Chain
chain:1-475
Reference Genes
BioGPS Gene:9136 RRP9
COSMIC (genes):RRP9 RRP9
CTD Gene:9136 RRP9
dbSNP Gene:9136 RRP9
ENSEMBL:ENSG00000114767 RRP9
HGNC:16829 RRP9
Monarch:9136 RRP9
NCBI Gene:9136 RRP9
OMIM:620013 RRP9
UCSC:O43818 RRP9
Reference Transcript
RefSeq:NM_004704.4 RRP9
Other Identifiers
11720523_at
16954623
204133_PM_at
204133_at
2675764
2675765
2675766
2675769
2675772
2675773
2675774
2675776
2675777
2675778
2675780
2675781
2675783
2675784
2675785
2675786
2675787
2675791
2675792
2675793
31882_at
8087790
9136
A_23_P6802
GE55142
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005730
GO:0006364
GO:0030515
GO:0031428
GO:0032040
GO:0034511
GO:0042274
GO:0043226
GO:1990904
HMNXSV003050978
ILMN_1689972
PH_hs_0027259
TC03001442.hg
g4759275_3p_at
Participates
as a component of
U3 snoRNP [nucleoplasm] (Homo sapiens)
Inferred To
U3-55K [nucleoplasm]
(Drosophila melanogaster)
RRP9 [nucleoplasm]
(Bos taurus)
RRP9 [nucleoplasm]
(Caenorhabditis elegans)
RRP9 [nucleoplasm]
(Canis familiaris)
RRP9 [nucleoplasm]
(Dictyostelium discoideum)
RRP9 [nucleoplasm]
(Plasmodium falciparum)
RRP9 [nucleoplasm]
(Saccharomyces cerevisiae)
RRP9 [nucleoplasm]
(Schizosaccharomyces pombe)
RRP9 [nucleoplasm]
(Sus scrofa)
Ghost homologue of RRP9 [nucleoplasm]
(Gallus gallus)
Rrp9 [nucleoplasm]
(Mus musculus)
Rrp9 [nucleoplasm]
(Rattus norvegicus)
Cross References
ENSEMBL
ENSP00000232888
,
ENST00000232888
OpenTargets
ENSG00000114767
HPA
ENSG00000114767-RRP9
PRO
O43818
Pharos - Targets
O43818
GlyGen
O43818
PDB
7MQA
,
4JXM
,
4J0W
,
7MQ9
,
7MQ8
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9Y2X3 NOP58
3
polySUMO2-K467,K497-NOP58 [nucleoplasm]
(R-HSA-4570460)
monoSUMO1-K467,K497-NOP58 [nucleoplasm]
(R-HSA-4570470)
NOP58 [nucleoplasm]
(R-HSA-4570488)
0.527
2
UniProt:P0DTC9 N
13
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729340)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-COV-9729341)
ADPr-p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729275)
p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729308)
p-11S,2T-N [cytosol]
(R-COV-9729264)
p-8S,2T-N [cytosol]
(R-COV-9729277)
p-8S-N [cytosol]
(R-COV-9729335)
p-S188,206-N [cytosol]
(R-COV-9729324)
N [cytosol]
(R-COV-9694300)
SUMO1-K62,ADPr-,p-11S,2T,met-R95,177,Ac-K375-N [cytosol]
(R-COV-9756489)
N [plasma membrane]
(R-COV-9694356)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [nucleolus]
(R-COV-9729339)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [plasma membrane]
(R-COV-9729325)
0.527
2
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