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DDX49 [nucleoplasm]
Stable Identifier
R-HSA-6790725
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Probable ATP-dependent RNA helicase DDX49 ecNumber3.6.4.13/ecNumber, DDX49_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
Major pathway of rRNA processing in the nucleolus and cytosol (Homo sapiens)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Homo sapiens)
18SE pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
30S pre-rRNA is nucleolytically processed at site 1 to yield 21S pre-rRNA (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
45S pre-rRNA is nucleolytically processed at site 2 (site 2b) to yield 30S pre-rRNA and 32S pre-rRNA (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
47S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
EMG1 of the SSU processome methylates pseudouridine-1248 of 18S rRNA yielding N(1)-methylpseudouridine-1248 (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
DDX49 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y6V7 DDX49
Gene Names
DDX49
Chain
chain:1-483
Reference Genes
BioGPS Gene:54555 DDX49
COSMIC (genes):DDX49 DDX49
CTD Gene:54555 DDX49
dbSNP Gene:54555 DDX49
ENSEMBL:ENSG00000105671 DDX49
ENSEMBL_homo_sapiens_GENE:ENSG00000105671.12 DDX49
HGNC:18684 DDX49
KEGG Gene (Homo sapiens):54555 DDX49
Monarch:54555 DDX49
NCBI Gene:54555 DDX49
UCSC:Q9Y6V7 DDX49
Reference Transcript
RefSeq:NM_019070.4 DDX49
Other Identifiers
11744566_a_at
16859900
210811_PM_s_at
210811_s_at
31807_3p_at
31807_PM_at
31807_at
3825447
3825448
3825449
3825450
3825453
3825455
3825457
3825458
3825459
3825460
3825463
3825466
3825467
3825469
3825470
3825471
3825472
3825473
4863599_3p_s_at
54555
8027100
86177_f_at
86179_at
A_14_P104060
A_23_P16573
GE82467
GO:0000166
GO:0003676
GO:0003723
GO:0003724
GO:0003824
GO:0004386
GO:0005515
GO:0005524
GO:0005634
GO:0005654
GO:0006364
GO:0016787
GO:0016887
GO:0030307
GO:0042254
GO:0043226
GO:0044357
GO:0140098
GO:0140657
HMNXSV003035335
PH_hs_0008422
TC19000366.hg
TC19002026.hg
g12803028_3p_s_at
Participates
as a component of
SSU Processome [nucleoplasm] (Homo sapiens)
Inferred To
DDX49 [nucleoplasm]
(Bos taurus)
DDX49 [nucleoplasm]
(Caenorhabditis elegans)
DDX49 [nucleoplasm]
(Canis familiaris)
DDX49 [nucleoplasm]
(Drosophila melanogaster)
DDX49 [nucleoplasm]
(Gallus gallus)
DDX49 [nucleoplasm]
(Mus musculus)
DDX49 [nucleoplasm]
(Plasmodium falciparum)
DDX49 [nucleoplasm]
(Saccharomyces cerevisiae)
DDX49 [nucleoplasm]
(Schizosaccharomyces pombe)
DDX49 [nucleoplasm]
(Sus scrofa)
Ghost homologue of DDX49 [nucleoplasm]
(Dictyostelium discoideum)
Ddx49 [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
NP_061943.2
OpenTargets
ENSG00000105671
GeneCards
Q9Y6V7
HPA
ENSG00000105671-DDX49
Ensembl
ENSG00000105671
,
ENSP00000247003
,
ENST00000247003
PRO
Q9Y6V7
Pharos - Targets
Q9Y6V7
HMDB Protein
HMDBP11679
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q16623 STX1A
5
STX1A [plasma membrane]
(R-HSA-449128)
STX1A(?-288) [plasma membrane]
(R-HSA-5246518)
STX1A(1-?) [cytosol]
(R-HSA-3065964)
STX1A [cytosol]
(R-HSA-9609866)
STX1A [endoplasmic reticulum membrane]
(R-HSA-9609878)
0.556
3
UniProt:P04591 gag
15
N-myristoyl GAG (P04591) protein [extracellular region]
(R-HIV-3597667)
N-myristoyl GAG [plasma membrane]
(R-HIV-184380)
N-myristoyl GAG (P04591) protein [endosome membrane]
(R-HIV-184361)
N-myristoyl GAG (P04591) protein [cytosol]
(R-HIV-184427)
MA (P04591) protein [cytosol]
(R-HIV-173300)
p6 (P04591) protein [cytosol]
(R-HIV-173425)
GAG Polyprotein (P04591) [cytosol]
(R-HIV-184393)
NC (P04591) protein [extracellular region]
(R-HIV-176851)
MA (P04591) protein [extracellular region]
(R-HIV-175160)
CA (P04591) protein [extracellular region]
(R-HIV-175361)
p6 (P04591) protein [extracellular region]
(R-HIV-175293)
CA (P04591) protein [cytosol]
(R-HIV-173327)
NC (P04591) protein [cytosol]
(R-HIV-173308)
p6 (P04591) [nucleoplasm]
(R-HIV-175152)
MA (P04591) protein [nucleoplasm]
(R-HIV-175251)
0.462
2
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