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SRRT [nucleoplasm]
Stable Identifier
R-HSA-6814858
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Serrate RNA effector molecule homolog, SRRT_HUMAN, ASR2, ARS2B
Locations in the PathwayBrowser for interactor UniProt:Q53F19
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA polymerase II transcribes snRNA genes (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
SRRT [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal E complex (Homo sapiens)
SRRT [nucleoplasm] (Homo sapiens)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
SRRT [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9BXP5 SRRT
Gene Names
SRRT, ARS2, ASR2
Chain
initiator methionine:, chain:2-876
Reference Genes
BioGPS Gene:51593 SRRT
COSMIC (genes):SRRT SRRT
CTD Gene:51593 SRRT
dbSNP Gene:51593 SRRT
ENSEMBL:ENSG00000087087 SRRT
ENSEMBL_homo_sapiens_GENE:ENSG00000087087.20 SRRT
HGNC:24101 SRRT
KEGG Gene (Homo sapiens):51593 SRRT
Monarch:51593 SRRT
NCBI Gene:51593 SRRT
OMIM:614469 SRRT
UCSC:Q9BXP5 SRRT
Reference Transcript
RefSeq:NM_015908.5 SRRT
RefSeq:NM_001128853.1 SRRT
RefSeq:NM_001128854.1 SRRT
RefSeq:NM_001128852.1 SRRT
Other Identifiers
11717918_a_at
11717919_a_at
11752124_a_at
11752125_x_at
11763723_a_at
11763978_a_at
17049573
201679_PM_at
201679_at
201680_PM_x_at
201680_x_at
222047_PM_s_at
222047_s_at
3015942
3015944
3015950
3015951
3015952
3015958
3015959
3015960
3015962
3015963
3015965
3015967
3015969
3015970
3015971
3015973
3015974
3015975
3015976
3015977
3015979
3015981
3015983
3015984
3015985
39832_at
51593
8134992
87773_s_at
A_23_P111481
A_23_P111487
A_24_P383080
A_33_P3299590
GE56375
GE82044
GE87455
GO:0003676
GO:0003677
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005737
GO:0006351
GO:0006355
GO:0006397
GO:0016071
GO:0016604
GO:0030154
GO:0030674
GO:0031047
GO:0031053
GO:0032991
GO:0043226
GO:0046685
GO:0048856
GO:0050769
GO:0060090
GO:0097150
GO:0140262
GO:1990904
HMNXSV003058187
Hs.111801.0.S1_3p_at
ILMN_2358202
PH_hs_0006128
TC07000636.hg
g7706237_3p_a_at
Participates
as a component of
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
Spliceosomal B complex [nucleoplasm] (Homo sapiens)
Spliceosomal E complex [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
CBCAP:capped snRNA U1,U2,U4,U4atac,U5,U11,U12 [nucleoplasm] (Homo sapiens)
CBCAP:capped pre-snRNA [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
as an input of
Formation of the Spliceosomal E complex (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
as an output of
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
Inferred To
srrt [nucleoplasm]
(Danio rerio)
Srrt [nucleoplasm]
(Mus musculus)
Srrt [nucleoplasm]
(Rattus norvegicus)
Ghost homologue of SRRT [nucleoplasm]
(Gallus gallus)
Ghost homologue of SRRT [nucleoplasm]
(Xenopus tropicalis)
Ars2 [nucleoplasm]
(Drosophila melanogaster)
SRRT [nucleoplasm]
(Bos taurus)
SRRT [nucleoplasm]
(Caenorhabditis elegans)
SRRT [nucleoplasm]
(Canis familiaris)
SRRT [nucleoplasm]
(Dictyostelium discoideum)
SRRT [nucleoplasm]
(Plasmodium falciparum)
SRRT [nucleoplasm]
(Sus scrofa)
pir2 [nucleoplasm]
(Schizosaccharomyces pombe)
Cross References
RefSeq
NP_056992.4
,
NP_001122326.1
,
NP_001122325.1
,
NP_001122324.1
OpenTargets
ENSG00000087087
HPA
ENSG00000087087-SRRT
GeneCards
Q9BXP5
Ensembl
ENSP00000480421
,
ENSP00000483556
,
ENST00000611405
,
ENSG00000087087
,
ENSP00000478341
,
ENST00000618411
,
ENST00000618262
,
ENSP00000481173
,
ENST00000614484
PRO
Q9BXP5
Pharos - Targets
Q9BXP5
PDB
6F7P
,
6F7J
,
6F8D
,
6F7S
,
5OO6
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P52298 NCBP2
2
NCBP2 [nucleoplasm]
(R-HSA-51463)
NCBP2 [cytosol]
(R-HSA-162458)
0.643
8
UniProt:Q13936 CACNA1C
1
CACNA1C [plasma membrane]
(R-HSA-265551)
0.547
2
UniProt:Q53F19 NCBP3
0.527
4
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