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RPRD1A [nucleoplasm]
Stable Identifier
R-HSA-6814899
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Regulation of nuclear pre-mRNA domain-containing protein 1A, RPR1A_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA polymerase II transcribes snRNA genes (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
Dephosphorylation and dissociation of RNA polymerase II at 3' end of snRNA gene (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
Integrator complex processes the 3' end of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
Pre-snRNA is elongated and capped with 7-methylguanosine (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q96P16 RPRD1A
Gene Names
RPRD1A, P15RS
Chain
initiator methionine:1, chain:2-312
Reference Genes
BioGPS Gene:55197 RPRD1A
COSMIC (genes):RPRD1A RPRD1A
CTD Gene:55197 RPRD1A
dbSNP Gene:55197 RPRD1A
ENSEMBL:ENSG00000141425 RPRD1A
HGNC:25560 RPRD1A
KEGG Gene (Homo sapiens):55197 RPRD1A
Monarch:55197 RPRD1A
NCBI Gene:55197 RPRD1A
OMIM:610347 RPRD1A
UCSC:Q96P16 RPRD1A
Reference Transcript
RefSeq:XM_011526048.1 RPRD1A
RefSeq:NM_001303412.1 RPRD1A
RefSeq:XM_011526049.1 RPRD1A
RefSeq:NM_018170.4 RPRD1A
RefSeq:XM_011526050.1 RPRD1A
RefSeq:NM_001303411.1 RPRD1A
RefSeq:NM_001303413.1 RPRD1A
Other Identifiers
0002060647
11717351_s_at
11717352_a_at
11744617_a_at
11746776_a_at
1555202_a_at
16854713
218209_s_at
222558_at
222559_s_at
225953_at
2903169
3804146
3804147
3804148
3804149
3804150
3804151
3804152
3804153
3804172
3804173
3804176
3804177
3804178
3804180
3804188
3804189
3804190
49318_at
55197
57569_at
8022914
A_23_P55639
A_24_P382253
GE87293
GO:0000993
GO:0003674
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0006397
GO:0006464
GO:0008150
GO:0009058
GO:0016591
GO:0019899
GO:0031124
GO:0032991
GO:0034641
GO:0042795
GO:0043226
GO:0070940
Hs.300906.0.S2_3p_a_at
Hs2.300906.2.S1_3p_s_at
ILMN_1764207
ILMN_2209180
PH_hs_0015493
TC18000457.hg
g8922574_3p_a_at
Participant Of
hasMember
RPRD1A,B [nucleoplasm]
Inferred To
RTT103 [nucleoplasm] (Saccharomyces cerevisiae)
cids-1 [nucleoplasm] (Caenorhabditis elegans)
rprd1a [nucleoplasm] (Danio rerio)
rprd1a [nucleoplasm] (Xenopus tropicalis)
Homologues of RPRD1A [nucleoplasm] (Caenorhabditis elegans)
Rprd1a [nucleoplasm] (Mus musculus)
Rprd1a [nucleoplasm] (Rattus norvegicus)
Dmel\CG9018 [nucleoplasm] (Drosophila melanogaster)
RPRD1A [nucleoplasm] (Canis familiaris)
RPRD1A [nucleoplasm] (Gallus gallus)
RPRD1A [nucleoplasm] (Schizosaccharomyces pombe)
RPRD1A [nucleoplasm] (Sus scrofa)
nrd-1 [nucleoplasm] (Caenorhabditis elegans)
cids-2 [nucleoplasm] (Caenorhabditis elegans)
Cross References
RefSeq
NP_060640.2
,
XP_011524351.1
,
NP_001290341.1
,
XP_011524350.1
,
XP_011524352.1
,
NP_001290342.1
,
NP_001290340.1
OpenTargets
ENSG00000141425
HPA
ENSG00000141425-RPRD1A
GeneCards
Q96P16
Ensembl
ENSP00000381984
,
ENSP00000465444
,
ENSP00000349955
,
ENST00000399022
,
ENST00000588737
,
ENSP00000467991
,
ENST00000357384
,
ENST00000590898
,
ENSG00000141425
PRO
Q96P16
PDB
4NAC
,
4JXT
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O60341 KDM1A
1
KDM1A [nucleoplasm]
(R-HSA-996769)
0.502
2
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