Reactome | SNRPD2 [nucleoplasm]

SNRPD2 [nucleoplasm]

Stable Identifier

R-HSA-71901

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

Sm protein D2, SMD2_HUMAN, Small nuclear ribonucleoprotein Sm D2, snRNP core protein D2, Sm-D2

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P62316 SNRPD2

Gene Names

SNRPD2, SNRPD1

Chain

initiator methionine:1, chain:2-118

Reference Genes

BioGPS Gene:6633 SNRPD2

COSMIC (genes):SNRPD2 SNRPD2

CTD Gene:6633 SNRPD2

dbSNP Gene:6633 SNRPD2

ENSEMBL:ENSG00000125743 SNRPD1

HGNC:11159 SNRPD2

KEGG Gene (Homo sapiens):6633 SNRPD2

Monarch:6633 SNRPD2

NCBI Gene:6633 SNRPD2

OMIM:601061 SNRPD2

UCSC:P62316 SNRPD2

Reference Transcript

Other Identifiers

0005720341

0006350100

11757666_x_at

16873391

200826_at

35270_at

3865569

3865570

3865571

3865572

3865575

3865576

3865577

3865578

3865579

3865580

3865581

3865582

3865583

6633

8037642

A_24_P74160

GE58956

GO:0000245

GO:0000387

GO:0000398

GO:0003674

GO:0003723

GO:0005515

GO:0005575

GO:0005576

GO:0005615

GO:0005622

GO:0005634

GO:0005654

GO:0005681

GO:0005682

GO:0005685

GO:0005686

GO:0005687

GO:0005689

GO:0005737

GO:0005829

GO:0006397

GO:0006810

GO:0006913

GO:0008150

GO:0008380

GO:0022607

GO:0022618

GO:0030532

GO:0032991

GO:0034641

GO:0034709

GO:0034715

GO:0034719

GO:0043226

GO:0046540

GO:0051170

GO:0065003

GO:0070062

GO:0071005

GO:0071007

GO:0071011

GO:0071013

ILMN_1679088

ILMN_1771060

ILMN_2369785

PH_hs_0019804

PH_hs_0033284

TC19001628.hg

U15008_at

g7242206_3p_at

Participant Of

hasComponent

Other forms of this molecule

SNRPD2 [cytosol]

Inferred To

SmD2 [nucleoplasm] (Drosophila melanogaster)

Ghost homologue of SNRPD2 [nucleoplasm] (Bos taurus)

snrpd2 [nucleoplasm] (Danio rerio)

snrpd2 [nucleoplasm] (Dictyostelium discoideum)

snrpd2 [nucleoplasm] (Xenopus tropicalis)

snr-4 [nucleoplasm] (Caenorhabditis elegans)

SNRPD2 [nucleoplasm] (Canis familiaris)

SNRPD2 [nucleoplasm] (Gallus gallus)

SNRPD2 [nucleoplasm] (Sus scrofa)

Snrpd2 [nucleoplasm] (Mus musculus)

Snrpd2 [nucleoplasm] (Rattus norvegicus)

Cross References

RefSeq

NP_808210.2, NP_004588.1

OpenTargets

ENSG00000125743

HPA

ENSG00000125743-SNRPD2

GeneCards

P62316

Ensembl

ENSG00000125743, ENSP00000342374, ENST00000588301, ENSP00000465216, ENSP00000375798, ENSP00000465952, ENST00000391932, ENST00000587367, ENST00000342669, ENST00000588599, ENSP00000466152

PRO

P62316

PDB

6Y53, 1B34, 5XJQ, 6FF7, 6QW6, 6AHD, 6AH0, 6QX9, 5XJL, 5Z58, 5XJT, 5O9Z, 6ID1, 3JCR, 6Y5Q, 3CW1, 5XJC, 5XJU, 4F7U, 4V98, 5MQF, 5XJR, 5Z56, 5YZG, 4WZJ, 6QDV, 4PJO, 3PGW, 6ID0, 5XJS, 5Z57, 6ICZ

Interactors (17)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P54105 CLNS1A	1	CLNS1A [cytosol] (R-HSA-191796)	0.844	11
UniProt:P62306 SNRPF	2	SNRPF [nucleoplasm] (R-HSA-71907) SNRPF [cytosol] (R-HSA-191852)	0.801	11
UniProt:Q9Y333 LSM2	2	LSM2 [nucleoplasm] (R-HSA-71894) LSM2 [cytosol] (R-HSA-429849)	0.668	3
UniProt:P62312 LSM6	2	LSM6 [nucleoplasm] (R-HSA-6806794) LSM6 [cytosol] (R-HSA-429936)	0.667	3
UniProt:P14678 SNRPB	4	2xMe-SNRPB [cytosol] (R-HSA-192218) SNRPB [cytosol] (R-HSA-191798) SNRPB [nucleoplasm] (R-HSA-71896) Me2-R108,R112-SNRPB [nucleoplasm] (R-HSA-192213)	0.656	3
UniProt:Q16637 SMN1	2	SMN1 [cytosol] (R-HSA-191839) SMN1 [nucleoplasm] (R-HSA-191892)	0.643	3
UniProt:O14893 GEMIN2	2	GEMIN2 [cytosol] (R-HSA-191835) GEMIN2 [nucleoplasm] (R-HSA-191795)	0.623	4
UniProt:P62314 SNRPD1	3	2xMe-SNRPD1 [cytosol] (R-HSA-192217) SNRPD1 [cytosol] (R-HSA-191890) 2xMe-SNRPD1 [nucleoplasm] (R-HSA-192215)	0.573	3
UniProt:P62304 SNRPE	2	SNRPE [nucleoplasm] (R-HSA-71905) SNRPE [cytosol] (R-HSA-191782)	0.564	2
UniProt:Q8NHQ1 CEP70	1	CEP70 [cytosol] (R-HSA-380257)	0.556	3
UniProt:Q9BW66 CINP			0.556	3
UniProt:P54253 ATX1			0.556	3
UniProt:Q5MJ10 SPXN2			0.556	3
UniProt:P42858 HTT	1	HTT [nucleoplasm] (R-HSA-9023590)	0.556	3
UniProt:P08621 SNRNP70	1	SNRNP70 [nucleoplasm] (R-HSA-71913)	0.527	3
UniProt:Q8WWY3 PRPF31	1	PRPF31 [nucleoplasm] (R-HSA-6806772)	0.508	2
UniProt:P14678-2 SNRPB			0.499	2

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