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SRSF9 [nucleoplasm]
Stable Identifier
R-HSA-72037
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SR9 / SRp30, Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor SRp30C), Splicing factor, arginine/serine-rich 9, Pre-mRNA splicing factor SRp30C
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA Polymerase II Transcription Termination (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
mRNA polyadenylation (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Cleavage at the 3'-Splice Site and Exon Ligation (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of Exon Junction Complex (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of an intermediate Spliceosomal C (Bact) complex (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal A Complex (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal E Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B Complex (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal E complex (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal E Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Formation of the active Spliceosomal C (B*) complex (Homo sapiens)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Lariat Formation and 5'-Splice Site Cleavage (Homo sapiens)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
SRSF9 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q13242 SRSF9
Gene Names
SRSF9, SFRS9, SRP30C
Chain
chain:1-221
Reference Genes
BioGPS Gene:8683 SRSF9
COSMIC (genes):SRSF9 SRSF9
CTD Gene:8683 SRSF9
dbSNP Gene:8683 SRSF9
ENSEMBL:ENSG00000111786 SRSF9
HGNC:10791 SRSF9
KEGG Gene (Homo sapiens):8683 SRSF9
Monarch:8683 SRSF9
NCBI Gene:8683 SRSF9
OMIM:601943 SRSF9
UCSC:Q13242 SRSF9
Reference Transcript
RefSeq:NM_003769.2 SRSF9
Other Identifiers
0003830091
11718665_s_at
11718666_x_at
16771308
18670963
18670964
18670966
18670969
18670970
18670971
200044_PM_at
200044_at
201698_s_at
32573_at
3474511
3474512
3474513
3474517
3474521
3474522
3474526
3474527
3474528
3474529
3636280
7894520
7894716
7895072
7895215
7895916
7895934
7967060
8683
A_24_P390070
GE79246
GE88819
GO:0000381
GO:0000398
GO:0003674
GO:0003676
GO:0003723
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005730
GO:0006376
GO:0006397
GO:0006405
GO:0006406
GO:0006810
GO:0006913
GO:0008150
GO:0008380
GO:0009636
GO:0015031
GO:0016607
GO:0019904
GO:0022607
GO:0022618
GO:0031124
GO:0034641
GO:0043226
GO:0043279
GO:0045292
GO:0048025
GO:0065003
ILMN_1760683
PH_hs_0028981
PH_hs_0032907
TC12002045.hg
U30825_at
g4506902_3p_at
g4506902_3p_s_at
Participant Of
input
Formation of the Spliceosomal E complex
hasComponent
3' end cleaved, ligated exon containing complex [nucleoplasm]
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm]
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm]
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm]
Spliced mRNA:CBC:EJC:TREX [nucleoplasm]
Spliced mRNP [nucleoplasm]
Spliceosomal A Complex [nucleoplasm]
Spliceosomal Active C (B*) Complex [nucleoplasm]
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm]
Spliceosomal B Complex [nucleoplasm]
Spliceosomal E Complex [nucleoplasm]
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm]
output
Docking of the TAP:EJC Complex with the NPC
Inferred To
rsp-3 [nucleoplasm] (Caenorhabditis elegans)
SF2 [nucleoplasm] (Drosophila melanogaster)
SRSF9 [nucleoplasm] (Canis familiaris)
SRSF9 [nucleoplasm] (Sus scrofa)
srsf9 [nucleoplasm] (Danio rerio)
Ghost homologue of SRSF9 [nucleoplasm] (Dictyostelium discoideum)
Ghost homologue of SRSF9 [nucleoplasm] (Gallus gallus)
Ghost homologue of SRSF9 [nucleoplasm] (Xenopus tropicalis)
Srsf9 [nucleoplasm] (Mus musculus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Cross References
RefSeq
NP_003760.1
OpenTargets
ENSG00000111786
GeneCards
Q13242
HPA
ENSG00000111786-SRSF9
Ensembl
ENSG00000111786
,
ENST00000229390
,
ENSP00000229390
PRO
Q13242
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P38159 RBMX
1
RBMX [nucleoplasm]
(R-HSA-71939)
0.556
3
UniProt:P62995 TRA2B
1
TRA2B [nucleoplasm]
(R-HSA-8850859)
0.556
3
UniProt:Q15287 RNPS1
2
RNPS1 [cytosol]
(R-HSA-159256)
RNPS1 [nucleoplasm]
(R-HSA-156778)
0.556
3
UniProt:Q5JVS0 HABP4
2
HABP4 [cytosol]
(R-HSA-448328)
HABP4 [extracellular region]
(R-HSA-448329)
0.508
2
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