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PRPF40A [nucleoplasm]
Stable Identifier
R-HSA-8867890
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Pre-mRNA-processing factor 40 homolog A, PR40A_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal A Complex (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal E Complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B Complex (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal E complex (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
Spliceosomal E Complex [nucleoplasm] (Homo sapiens)
PRPF40A [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O75400 PRPF40A
Gene Names
PRPF40A, FBP11, FLAF1, FNBP3, HIP10, HYPA, HSPC225
Chain
chain:1-957
Reference Genes
BioGPS Gene:55660 PRPF40A
COSMIC (genes):PRPF40A PRPF40A
CTD Gene:55660 PRPF40A
dbSNP Gene:55660 PRPF40A
ENSEMBL:ENSG00000196504 PRPF40A
HGNC:16463 PRPF40A
KEGG Gene (Homo sapiens):55660 PRPF40A
Monarch:55660 PRPF40A
NCBI Gene:55660 PRPF40A
OMIM:612941 PRPF40A
UCSC:O75400 PRPF40A
Reference Transcript
RefSeq:NM_017892.3 PRPF40A
Participant Of
input
Formation of the Spliceosomal E complex
hasComponent
Spliceosomal A Complex [nucleoplasm]
Spliceosomal E Complex [nucleoplasm]
output
Formation of the Spliceosomal B Complex
Inferred To
ipo5 [nucleoplasm] (Xenopus tropicalis)
prpf40a [nucleoplasm] (Danio rerio)
PRPF40A [nucleoplasm] (Caenorhabditis elegans)
PRPF40A [nucleoplasm] (Canis familiaris)
PRPF40A [nucleoplasm] (Gallus gallus)
PRPF40A [nucleoplasm] (Sus scrofa)
Prp40 [nucleoplasm] (Drosophila melanogaster)
Prpf40a [nucleoplasm] (Mus musculus)
Prpf40a [nucleoplasm] (Rattus norvegicus)
Cross References
RefSeq
NP_060362.3
OpenTargets
ENSG00000196504
HPA
ENSG00000196504-PRPF40A
GeneCards
O75400
PRO
O75400
PDB
2L5F
,
2CQN
,
1YWJ
,
1ZR7
,
2DYF
,
1YWI
,
2LKS
,
2KZG
,
2L9V
,
1UZC
Interactors (9)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.743
15
UniProt:Q9NRR5 UBQL4
0.553
2
UniProt:Q9H190 SDCB2
0.553
2
UniProt:Q9BUJ2 HNRNPUL1
1
HNRNPUL1 [nucleoplasm]
(R-HSA-72106)
0.553
2
UniProt:Q53F19 NCBP3
0.527
2
UniProt:Q8N5F7 NKAP
0.508
2
UniProt:Q15459 SF3A1
1
SF3A1 [nucleoplasm]
(R-HSA-71962)
0.508
2
UniProt:Q12873 CHD3
2
SUMO1-K1971-CHD3 [nucleoplasm]
(R-HSA-8956372)
CHD3 [nucleoplasm]
(R-HSA-4657012)
0.508
2
UniProt:Q15637 SF1
1
SF1 [nucleoplasm]
(R-HSA-8865928)
0.482
3
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