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SSC5D [extracellular region]
Stable Identifier
R-HSA-8878615
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
extracellular region
Synonyms
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, SRCRL_HUMAN
Locations in the PathwayBrowser
Expand all
Vesicle-mediated transport (Homo sapiens)
Binding and Uptake of Ligands by Scavenger Receptors (Homo sapiens)
Scavenging by Class B Receptors (Homo sapiens)
SSC5D binds ligands (Homo sapiens)
SSC5D [extracellular region] (Homo sapiens)
SSC5D:PAMP [extracellular region] (Homo sapiens)
SSC5D [extracellular region] (Homo sapiens)
External Reference Information
External Reference
UniProt:A1L4H1 SSC5D
Gene Names
SSC5D
Chain
signal peptide:1-16, chain:17-1573
Reference Genes
BioGPS Gene:284297 SSC5D
COSMIC (genes):SSC5D SSC5D
CTD Gene:284297 SSC5D
dbSNP Gene:284297 SSC5D
ENSEMBL:ENSG00000179954 SSC5D
HGNC:26641 SSC5D
KEGG Gene (Homo sapiens):284297 SSC5D
Monarch:284297 SSC5D
NCBI Gene:284297 SSC5D
OMIM:618194 SSC5D
UCSC:A1L4H1 SSC5D
Reference Transcript
RefSeq:NM_001144950.1 SSC5D
RefSeq:NM_001195267.1 SSC5D
Other Identifiers
0003140193
0005860706
0107050278
11725868_at
16865699
230228_at
284297
3842195
3842196
3842197
3842199
3842201
3842202
3842204
3842207
3842208
3842209
3842210
3842211
3842212
3842215
3842216
3842218
3842219
3842220
3842221
3842222
3842223
3842224
3842225
3842226
3842227
73819_at
8031499
A_21_P0000127
A_33_P3303542
A_33_P3358898
GE852051
GE87604
GO:0001968
GO:0002376
GO:0003674
GO:0005044
GO:0005515
GO:0005575
GO:0005576
GO:0005615
GO:0005622
GO:0005737
GO:0006810
GO:0006897
GO:0006950
GO:0006952
GO:0007275
GO:0008150
GO:0016020
GO:0016192
GO:0031012
GO:0032677
GO:0032717
GO:0042494
GO:0043236
GO:0045087
GO:0048856
GO:0050829
GO:0050830
GO:0050840
GO:0062023
Hs.124747.0.A1_3p_at
ILMN_1763891
ILMN_1820437
ILMN_3290428
TC19000900.hg
Participant Of
hasComponent
SSC5D:PAMP [extracellular region]
input
SSC5D binds ligands
Cross References
RefSeq
NP_001182196.1
,
NP_001138422.1
OpenTargets
ENSG00000179954
GeneCards
A1L4H1
HPA
ENSG00000179954-SSC5D
Ensembl
ENSG00000179954
,
ENST00000389623
,
ENST00000587166
,
ENSP00000374274
,
ENSP00000467252
PRO
A1L4H1
Interactors (18)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q7Z6G3-2 NECAB2
0.718
6
UniProt:Q13503 MED21
1
MED21 [nucleoplasm]
(R-HSA-212456)
0.718
6
UniProt:Q9Y6Y8 SEC23IP
2
SEC23IP [COPII-coated ER to Golgi transport vesicle]
(R-HSA-5688153)
SEC23IP [cytosol]
(R-HSA-5688156)
0.718
6
UniProt:P37198 NUP62
2
NUP62 [cytosol]
(R-HSA-9634226)
NUP62 [nuclear envelope]
(R-HSA-157713)
0.718
6
UniProt:Q9UPT5-1 EXOC7
0.556
3
UniProt:Q7Z3Y8 KRT27
1
KRT27 [cytosol]
(R-HSA-6809587)
0.556
3
UniProt:Q15560 TCEA2
0.556
3
UniProt:Q96BD8 SKA1
1
SKA1 [cytosol]
(R-HSA-376228)
0.556
3
UniProt:Q96L14 C170L
0.556
3
UniProt:Q9P086 MED11
1
MED11 [nucleoplasm]
(R-HSA-556808)
0.556
3
UniProt:Q6QNY1 BL1S2
0.556
3
UniProt:Q9NX70 MED29
1
MED29 [nucleoplasm]
(R-HSA-556821)
0.556
3
UniProt:Q13077 TRAF1
3
TRAF1(1-163) [cytosol]
(R-HSA-5634199)
TRAF1 [cytosol]
(R-HSA-5634163)
TRAF1(164-416) [cytosol]
(R-HSA-5634204)
0.556
3
UniProt:Q96CS2 HAUS1
1
HAUS1 [cytosol]
(R-HSA-8855199)
0.556
3
UniProt:Q9UPT5 EXOC7
2
EXOC7 [cytosol]
(R-HSA-5623386)
EXOC7 [plasma membrane]
(R-HSA-2872288)
0.556
3
UniProt:O00560 SDCBP
3
SDCBP [azurophil granule lumen]
(R-HSA-6799372)
SDCBP [extracellular region]
(R-HSA-6806206)
SDCBP [cytosol]
(R-HSA-373639)
0.556
3
UniProt:Q96EV8 DTNBP1
1
DTNBP1 [cytosol]
(R-HSA-429819)
0.556
3
UniProt:Q13526 PIN1
2
PIN1 [nucleoplasm]
(R-HSA-936016)
PIN1 [cytosol]
(R-HSA-9626823)
0.556
3
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