Reactome | SSC5D [extracellular region]

SSC5D [extracellular region]

Stable Identifier

R-HSA-8878615

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

extracellular region

Synonyms

Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, SRCRL_HUMAN

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:A1L4H1 SSC5D

Gene Names

SSC5D

Chain

signal peptide:1-16, chain:17-1573

Reference Genes

BioGPS Gene:284297 SSC5D

COSMIC (genes):SSC5D SSC5D

CTD Gene:284297 SSC5D

dbSNP Gene:284297 SSC5D

ENSEMBL:ENSG00000179954 SSC5D

HGNC:26641 SSC5D

KEGG Gene (Homo sapiens):284297 SSC5D

Monarch:284297 SSC5D

NCBI Gene:284297 SSC5D

OMIM:618194 SSC5D

UCSC:A1L4H1 SSC5D

Reference Transcript

Other Identifiers

0003140193

0005860706

0107050278

11725868_at

16865699

230228_at

284297

3842195

3842196

3842197

3842199

3842201

3842202

3842204

3842207

3842208

3842209

3842210

3842211

3842212

3842215

3842216

3842218

3842219

3842220

3842221

3842222

3842223

3842224

3842225

3842226

3842227

42008

73819_at

8031499

A_21_P0000127

A_33_P3303542

A_33_P3358898

AAI30539

AAI30541

AC008735

ACJ02751

ACJ02752

BC130538

BC130540

CCDS46196

CCDS59424

ENSG00000179954

ENSP00000374274

ENSP00000467252

ENST00000389623

ENST00000389623.10

ENST00000587166

ENST00000587166.5

EntrezGene:284297

EntrezGene:SSC5D

EU699476

EU699477

GE852051

GE87604

GO:0001968

GO:0002376

GO:0003674

GO:0005044

GO:0005515

GO:0005575

GO:0005576

GO:0005615

GO:0005622

GO:0005623

GO:0005737

GO:0005886

GO:0006810

GO:0006897

GO:0006950

GO:0006952

GO:0007275

GO:0008150

GO:0009897

GO:0016020

GO:0016192

GO:0031012

GO:0042494

GO:0043236

GO:0045087

GO:0048856

GO:0050829

GO:0050830

GO:0050840

GO:0062023

GO:2000482

GO:2000483

HGNC:26641

HPA042008

Hs.124747.0.A1_3p_at

ILMN_1763891

ILMN_1820437

ILMN_3290428

IPR001190

IPR017448

IPR036772

K7EPL3

M0QZ17

MIM:618194

NM_001144950

NM_001195267

NP_001138422

NP_001182196

PF00530

PR00258

SM00202

SSC5D

SSC5D-201

SSC5D-202

TC19000900.hg

UPI000192952A

UPI0001E13BF1

Participant Of

hasComponent

SSC5D:PAMP [extracellular region]

input

SSC5D binds ligands

Cross References

RefSeq

NP_001182196.1, NP_001138422.1

OpenTargets

ENSG00000179954

GeneCards

A1L4H1

PRO

A1L4H1

Interactors (18)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q7Z6G3-2 NECAB2			0.696	5
UniProt:Q96L14 C170L			0.696	5
UniProt:Q13503 MED21	1	MED21 [nucleoplasm] (R-HSA-212456)	0.696	5
UniProt:Q9Y6Y8 SEC23IP	2	SEC23IP [COPII-coated ER to Golgi transport vesicle] (R-HSA-5688153) SEC23IP [cytosol] (R-HSA-5688156)	0.696	5
UniProt:P37198 NUP62	1	NUP62 [nuclear envelope] (R-HSA-157713)	0.696	5
UniProt:Q96EV8 DTNBP1	1	DTNBP1 [cytosol] (R-HSA-429819)	0.556	3
UniProt:Q13077 TRAF1	3	TRAF1(1-163) [cytosol] (R-HSA-5634199) TRAF1 [cytosol] (R-HSA-5634163) TRAF1(164-416) [cytosol] (R-HSA-5634204)	0.556	3
UniProt:Q9UPT5 EXOC7	2	EXOC7 [plasma membrane] (R-HSA-2872288) EXOC7 [cytosol] (R-HSA-5623386)	0.556	3
UniProt:Q9UPT5-1 EXOC7			0.488	2
UniProt:Q7Z3Y8 KRT27	1	KRT27 [cytosol] (R-HSA-6809587)	0.488	2
UniProt:Q96BD8 SKA1	1	SKA1 [cytosol] (R-HSA-376228)	0.488	2
UniProt:Q15560 TCEA2			0.488	2
UniProt:Q9P086 MED11	1	MED11 [nucleoplasm] (R-HSA-556808)	0.488	2
UniProt:Q6QNY1 BL1S2			0.488	2
UniProt:Q13526 PIN1	2	PIN1 [nucleoplasm] (R-HSA-936016) PIN1 [cytosol] (R-HSA-9626823)	0.488	2
UniProt:Q9NX70 MED29	1	MED29 [nucleoplasm] (R-HSA-556821)	0.488	2
UniProt:Q96CS2 HAUS1	1	HAUS1 [cytosol] (R-HSA-8855199)	0.488	2
UniProt:O00560 SDCBP	3	SDCBP [extracellular region] (R-HSA-6806206) SDCBP [azurophil granule lumen] (R-HSA-6799372) SDCBP [cytosol] (R-HSA-373639)	0.488	2

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