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PCGF5 [nucleoplasm]
Stable Identifier
R-HSA-8937962
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Polycomb group RING finger protein 5, PCGF5_HUMAN, RING finger protein 159, RNF159
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional regulation by RUNX1 (Homo sapiens)
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known (Homo sapiens)
RUNX1 binds PRC1 complexes (Homo sapiens)
(PRC1.4,PRC1.5) [nucleoplasm] (Homo sapiens)
PRC1.5 [nucleoplasm] (Homo sapiens)
PCGF5 [nucleoplasm] (Homo sapiens)
RUNX1:CBFB:(PRC1.4,PRC1.5) [nucleoplasm] (Homo sapiens)
(PRC1.4,PRC1.5) [nucleoplasm] (Homo sapiens)
PRC1.5 [nucleoplasm] (Homo sapiens)
PCGF5 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q86SE9 PCGF5
Gene Names
PCGF5, RNF159
Chain
chain:1-256
Reference Genes
BioGPS Gene:84333 PCGF5
COSMIC (genes):PCGF5 PCGF5
CTD Gene:84333 PCGF5
dbSNP Gene:84333 PCGF5
ENSEMBL:ENSG00000180628 PCGF5
ENSEMBL_homo_sapiens_GENE:ENSG00000180628.15 PCGF5
HGNC:28264 PCGF5
KEGG Gene (Homo sapiens):84333 PCGF5
Monarch:84333 PCGF5
NCBI Gene:84333 PCGF5
OMIM:617407 PCGF5
UCSC:Q86SE9 PCGF5
Reference Transcript
RefSeq:XM_017016776.1 PCGF5
RefSeq:NM_032373.4 PCGF5
RefSeq:XM_011540271.2 PCGF5
RefSeq:NM_001256549.1 PCGF5
RefSeq:NM_001257101.1 PCGF5
Other Identifiers
11724553_at
11724554_s_at
11748523_a_at
11758060_s_at
16707327
226326_PM_at
226326_at
229194_PM_at
229194_at
235331_PM_x_at
235331_x_at
3257675
3257676
3257691
3257692
3257693
3257694
3257695
3257706
3257707
3257708
3257709
3257712
3257715
3257717
3257720
3257721
3257722
3257723
3257724
3257725
3257726
3257727
3257728
3257729
3257730
3257731
63364_at
68649_at
7929132
84333
88871_at
A_14_P117293
A_24_P880043
A_24_P941699
GE86998
GO:0000805
GO:0003824
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005794
GO:0005813
GO:0005815
GO:0005856
GO:0006325
GO:0006351
GO:0006355
GO:0006357
GO:0016740
GO:0031519
GO:0035102
GO:0043226
GO:0045944
GO:0046872
GO:0060816
GO:0060818
GO:0140096
GO:0140862
HMNXSV003004796
Hs.11356.0.A1_3p_at
Hs.126695.0.A1_3p_at
Hs.197484.0.A1_3p_at
ILMN_1788059
PH_hs_0023213
TC10000652.hg
TC10002216.hg
Participates
as a component of
PRC1.5 [nucleoplasm] (Homo sapiens)
Inferred To
Pcgf5 [nucleoplasm]
(Mus musculus)
Pcgf5 [nucleoplasm]
(Rattus norvegicus)
PCGF5 [nucleoplasm]
(Bos taurus)
PCGF5 [nucleoplasm]
(Canis familiaris)
PCGF5 [nucleoplasm]
(Gallus gallus)
PCGF5 [nucleoplasm]
(Sus scrofa)
Cross References
RefSeq
XP_011538573.1
,
NP_001244030.1
,
NP_115749.2
,
NP_001243478.1
,
XP_016872265.1
OpenTargets
ENSG00000180628
HPA
ENSG00000180628-PCGF5
GeneCards
Q86SE9
Ensembl
ENSG00000180628
,
ENSP00000445704
,
ENST00000614189
,
ENST00000336126
,
ENSP00000479492
,
ENSP00000337500
,
ENST00000543648
PRO
Q86SE9
Pharos - Targets
Q86SE9
PDB
4S3O
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q12933 TRAF2
5
TRAF2 [nucleoplasm]
(R-HSA-8862199)
K63polyUb-TRAF2 [nucleoplasm]
(R-HSA-8862194)
K63polyUb-TRAF2 [cytosol]
(R-HSA-8862193)
PolyUb-TRAF2 [cytosol]
(R-HSA-6782848)
TRAF2 [cytosol]
(R-HSA-66370)
0.556
3
UniProt:Q96LA8 PRMT6
1
PRMT6 [nucleoplasm]
(R-HSA-5226884)
0.508
2
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