Reactome | p-11Y PDGFRA V536E [plasma membrane]

p-11Y PDGFRA V536E [plasma membrane]

Stable Identifier

R-HSA-9672018

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

plasma membrane

Synonyms

Alpha platelet-derived growth factor receptor, PGDS_HUMAN

Icon

Locations in the PathwayBrowser

Expand all

Literature References

PubMed ID	Title	Journal	Year
23752188	PDGFRA alterations in cancer: characterization of a gain-of-function V536E transmembrane mutant as well as loss-of-function and passenger mutations Polyansky, AA, Hallberg, B, Van Cauwenberghe, S, Demoulin, JB, Montano-Almendras, CP, Chand, D, Velghe, AI, Essaghir, A, Charni, S	Oncogene	2014

External Reference Information

External Reference

UniProt:P16234 PDGFRA

Gene Names

PDGFRA, PDGFR2, RHEPDGFRA

Chain

signal peptide:1-23, chain:24-1089

Reference Genes

BioGPS Gene:5156 PDGFRA

COSMIC (genes):PDGFRA PDGFRA

CTD Gene:5156 PDGFRA

dbSNP Gene:5156 PDGFRA

ENSEMBL:ENSG00000134853 PDGFRA

HGNC:8803 PDGFRA

KEGG:hsa:5156 PDGFRA

Monarch:5156 PDGFRA

NCBI Gene:5156 PDGFRA

OMIM:173490 PDGFRA

UCSC:P16234 PDGFRA

Reference Transcript

Participates

as a component of

p-11Y PDGFRA V536E dimer [plasma membrane] (Homo sapiens)

Other forms of this molecule

PDGFRA L629P [plasma membrane]

PDGFRA N659K [plasma membrane]

PDGFRA T674I [plasma membrane]

PDGFRA S601P [plasma membrane]

PDGFRA Y288C [endoplasmic reticulum membrane]

PDGFRA Y375_K455del [endoplasmic reticulum membrane]

p-11Y PDGFRA Y288C [endoplasmic reticulum membrane]

p-11Y-PDGFRA Y375_K455del [endoplasmic reticulum membrane]

PDGFRA D842_M844del [plasma membrane]

PDGFRA D842Y [plasma membrane]

PDGFRA D842V [plasma membrane]

PDGFRA I843_D846del [plasma membrane]

PDGFRA D842_H845del [plasma membrane]

PDGFRA D842del [plasma membrane]

PDGFRA D842_I843delinsV [plasma membrane]

PDGFRA D846Y [plasma membrane]

PDGFRA D843_845del [plasma membrane]

PDGFRA D842_D846del [plasma membrane]

PDGFRA N848K [plasma membrane]

PDGFRA Y849C [plasma membrane]

PDGFRA D843_844del [plasma membrane]

PDGFRA D846V [plasma membrane]

PDGFRA D842L [plasma membrane]

PDGFRA V561D [plasma membrane]

PDGFRA V561A [plasma membrane]

PDGFRA V536E [plasma membrane]

PDGFRA V536M [plasma membrane]

p-11Y PDGFRA D842V [plasma membrane]

p-11Y PDGFRA D846Y [plasma membrane]

p-11Y-PDGFRA [plasma membrane]

PDGFRA [plasma membrane]

p-11Y PDGFRA V561A [plasma membrane]

p-11Y PDGFRA V561D [plasma membrane]

p-11Y PDGFRA V536M [plasma membrane]

p-11Y PDGFRA D846V [plasma membrane]

p-11Y PDGFRA D842L dimer [plasma membrane]

p-11Y PDGFRA N848K [plasma membrane]

p-11Y PDGFRA D843_845del [plasma membrane]

p-10Y PDGFRA Y849C [plasma membrane]

p-11Y PDGFRA D842_D846del [plasma membrane]

p-11Y PDGFRA D842_H845del [plasma membrane]

p-11Y PDGFRA D842Y [plasma membrane]

p-11Y PDGFRA D843_846del [plasma membrane]

p-11Y-PDGFRA D842_I843delinsV [plasma membrane]

p-11Y PDGFRA D843_844del [plasma membrane]

p-11Y PDGFRA D842del [plasma membrane]

Modified Residues

Name

L-valine 536 replaced with L-glutamic acid

Coordinate

536

PsiMod

L-valine removal [MOD:01650]

A protein modification that effectively removes or replaces an L-valine.

L-glutamic acid residue [MOD:00015]

A protein modification that effectively converts a source amino acid residue to an L-glutamic acid.

Name

O4'-phospho-L-tyrosine at 1018

Coordinate

1018

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 572

Coordinate

572

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 574

Coordinate

574

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 720

Coordinate

720

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 731

Coordinate

731

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 742

Coordinate

742

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 754

Coordinate

754

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 762

Coordinate

762

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 768

Coordinate

768

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 988

Coordinate

988

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Name

O4'-phospho-L-tyrosine at 849

Coordinate

849

PsiMod Name

O4'-phospho-L-tyrosine [MOD:00048]

PsiMod Definition

A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.

Disease

Name	Identifier	Synonyms
cancer	DOID:162	malignant tumor, malignant neoplasm, primary cancer
astrocytoma	DOID:3069	astrocytoma of Cerebrum, Astrocytic tumor, astrocytoma of brain (disorder), astroglioma, astrocytoma, no ICD-O subtype (morphologic abnormality), cerebral astrocytoma

Cross References

RefSeq

XP_005265800.1, NP_006197.1, NP_001334758.1

Guide to Pharmacology - Targets

1803

OpenTargets

ENSG00000134853

ENSEMBL

ENST00000257290, ENSP00000425648, ENST00000508170, ENSP00000257290, ENST00000509490, ENSG00000134853, ENSP00000424218

ZINC - FDA approved

PGFRA_HUMAN

ZINC - Substances

PGFRA_HUMAN

ZINC - Biogenic

PGFRA_HUMAN

ZINC target

P16234

PRO

P16234

GlyGen

P16234

PDB

1GQ5, 5K5X, 7LBF, 6A32, 7RAM, 8PQI, 8PQK, 8PQH, 8PQJ, 6JOI, 5GRN, 6JOJ, 6JOK, 6JOL

ZINC - Investigational

PGFRA_HUMAN

COSMIC

COSV57271679

GeneCards

PDGFRA

HPA

ENSG00000134853-PDGFRA

Pharos - Targets

P16234

Orphanet

PDGFRA

ZINC - Predictions - Purchasable

PGFRA_HUMAN

HMDB Protein

HMDBP01355

Interactors (10)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P01127 PDGFB	8	PDGFB (82-190) [extracellular region] (R-HSA-184201) PDGFB(82-241) [extracellular region] (R-HSA-381904) PDGFB(1-241) [endoplasmic reticulum lumen] (R-HSA-381903) PDGFB(1-241) [Golgi membrane] (R-HSA-380740) PDGFB(1-81) [Golgi lumen] (R-HSA-389058) PDGFB(191-241) [Golgi lumen] (R-HSA-396945) PDGFB(21-81) [platelet alpha granule lumen] (R-HSA-184200) PDGFB(82-241) [platelet alpha granule lumen] (R-HSA-387075)	0.733	11
UniProt:P09619 PDGFRB	3	p-12Y-PDGFRB [plasma membrane] (R-HSA-186803) PDGFRB [plasma membrane] (R-HSA-186767) p-11Y-PDGFRB [plasma membrane] (R-HSA-8864039)	0.706	5
UniProt:P04085 PDGFA	1	PDGFA [extracellular region] (R-HSA-2426265)	0.691	6
UniProt:P00533 EGFR	20	p-6Y-EGFR [clathrin-coated endocytic vesicle membrane] (R-HSA-8869138) p-5Y-EGFRvIII [plasma membrane] (R-HSA-1248649) EGFRvIII [plasma membrane] (R-HSA-1214162) p-6Y-EGFR E746_A750del;T790M [plasma membrane] (R-HSA-1182985) p-6Y-EGFR L858R;T790M [plasma membrane] (R-HSA-1182984) p-6Y-EGFR A767_V769dup [plasma membrane] (R-HSA-1996343) p-6Y-EGFR N771_H773dup [plasma membrane] (R-HSA-1996342) p-6Y-EGFR K739_I744dup [plasma membrane] (R-HSA-1996346) p-6Y-EGFR D770_N771insNPG [plasma membrane] (R-HSA-1996335) p-6Y-EGFR E746_A750del [plasma membrane] (R-HSA-1181214) p-6Y-EGFR L858R [plasma membrane] (R-HSA-1173211) p-6Y-EGFR G719S [plasma membrane] (R-HSA-1169417) p-6Y-EGFR L747_P753delinsS [plasma membrane] (R-HSA-1228038) p-6Y-EGFR L747_A750delinsP [plasma membrane] (R-HSA-1228044) p-6Y-EGFR L747_T751del [plasma membrane] (R-HSA-1228041) p-6Y-EGFR L747_S752del [plasma membrane] (R-HSA-1228040) p-6Y-EGFR L747_T751delinsP [plasma membrane] (R-HSA-1228042) p-6Y-EGFR E746_T751delinsA [plasma membrane] (R-HSA-1228037) p-6Y-EGFR E746_S752delinsV [plasma membrane] (R-HSA-1228039) p-6Y-EGFR L861Q [plasma membrane] (R-HSA-1177541)	0.683	4
UniProt:P46108 CRK	1	CRK [cytosol] (R-HSA-2980677)	0.671	4
UniProt:Q9NRA1 PDGFC			0.656	3
UniProt:P46109 CRKL	2	CRKL [cytosol] (R-HSA-354384) p-CRKL [cytosol] (R-HSA-9024730)	0.569	3
UniProt:Q8N6L0 KASH5			0.556	3
UniProt:P19174 PLCG1	6	p-4Y-PLCG1 [plasma membrane] (R-HSA-167679) PLCG1 [cytosol] (R-HSA-202320) PLCG1 [plasma membrane] (R-HSA-167682) p-Y771,Y783,Y1254-PLCG1 [cytosol] (R-HSA-202357) p-Y771,Y783-PLCG1 [plasma membrane] (R-HSA-1169084) p-Y-PLCG1 [cytosol] (R-HSA-9029082)	0.544	3
UniProt:Q8WVM8 SCFD1	1	SCFD1 [cytosol] (R-HSA-5688147)	0.483	2