Reactome | GPATCH1 [nucleoplasm]

GPATCH1 [nucleoplasm]

Stable Identifier

R-HSA-9770419

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

G patch domain-containing protein 1, GPTC1_HUMAN

Locations in the PathwayBrowser for interactor UniProt:Q15029 EFTUD2

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External Reference Information

External Reference

UniProt:Q9BRR8 GPATCH1

Gene Names

GPATCH1, ECGP, GPATC1

Chain

initiator methionine:, chain:2-931

Reference Genes

BioGPS Gene:55094 GPATCH1

COSMIC (genes):GPATCH1 GPATCH1

CTD Gene:55094 GPATCH1

dbSNP Gene:55094 GPATCH1

ENSEMBL:ENSG00000076650 GPATCH1

ENSEMBL_homo_sapiens_GENE:ENSG00000076650.7 GPATCH1

HGNC:24658 GPATCH1

KEGG Gene (Homo sapiens):55094 GPATCH1

Monarch:55094 GPATCH1

NCBI Gene:55094 GPATCH1

UCSC:Q9BRR8 GPATCH1

Reference Transcript

RefSeq:NM_018025.2 GPATCH1

Other Identifiers

11730884_a_at

16860587

219818_PM_s_at

219818_s_at

3829176

3829177

3829178

3829179

3829180

3829181

3829183

3829184

3829185

3829186

3829187

3829188

3829189

3829190

3829191

3829192

3829193

3829196

3829198

3829199

3829200

3829201

3829202

3829203

3829204

3829205

3829206

51829_at

52644_at

55094

8027521

A_23_P27822

GE55688

GO:0000398

GO:0003676

GO:0003723

GO:0005634

GO:0005654

GO:0006397

GO:0006807

GO:0016071

GO:0043170

GO:0043226

GO:0044238

GO:0071013

HMNXSV003039768

HMNXSV003055858

ILMN_1655625

PH_hs_0003610

TC19000432.hg

g8922282_3p_s_at

Participates

as a component of

as an input of

Formation of the Spliceosomal B* complex (Homo sapiens)

as an output of

Formation of the Spliceosomal C* complex (Homo sapiens)

Inferred To

GPATCH1 [nucleoplasm] (Bos taurus)

GPATCH1 [nucleoplasm] (Caenorhabditis elegans)

GPATCH1 [nucleoplasm] (Canis familiaris)

GPATCH1 [nucleoplasm] (Dictyostelium discoideum)

GPATCH1 [nucleoplasm] (Drosophila melanogaster)

GPATCH1 [nucleoplasm] (Gallus gallus)

GPATCH1 [nucleoplasm] (Schizosaccharomyces pombe)

GPATCH1 [nucleoplasm] (Sus scrofa)

Ghost homologue of GPATCH1 [nucleoplasm] (Danio rerio)

Ghost homologue of GPATCH1 [nucleoplasm] (Plasmodium falciparum)

Gpatch1 [nucleoplasm] (Mus musculus)

Gpatch1 [nucleoplasm] (Rattus norvegicus)

gpatch1 [nucleoplasm] (Xenopus tropicalis)

Cross References

RefSeq

NP_060495.2

OpenTargets

ENSG00000076650

HPA

ENSG00000076650-GPATCH1

GeneCards

Q9BRR8

Ensembl

ENST00000170564, ENSG00000076650, ENSP00000170564

PRO

Q9BRR8

Pharos - Targets

Q9BRR8

Interactors (11)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q56P03 EAPP			0.527	2
UniProt:P62304 SNRPE	2	SNRPE [nucleoplasm] (R-HSA-71905) SNRPE [cytosol] (R-HSA-191782)	0.527	4
UniProt:O95926 SYF2	1	SYF2 [nucleoplasm] (R-HSA-8867884)	0.527	3
UniProt:Q9BQ65 USB1			0.527	4
UniProt:Q9BRX9 WDR83	1	WDR83 [endosome membrane] (R-HSA-5672942)	0.527	4
UniProt:Q96AT1 K1143			0.527	2
UniProt:P63162 SNRPN	1	Me2-R108,R112-SNRPN [nucleoplasm] (R-HSA-8865931)	0.527	3
UniProt:Q9BW85 YJU2	1	YJU2 [nucleoplasm] (R-HSA-9770430)	0.527	2
UniProt:Q9UMS4 PRPF19	1	PRPF19 [nucleoplasm] (R-HSA-5420907)	0.527	3
UniProt:P62306 SNRPF	2	SNRPF [nucleoplasm] (R-HSA-71907) SNRPF [cytosol] (R-HSA-191852)	0.527	3
UniProt:Q15029 EFTUD2	1	EFTUD2 [nucleoplasm] (R-HSA-71883)	0.483	3

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