Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
Upf3b [cytosol]
Stable Identifier
R-MMU-159258
Type
Protein [EntityWithAccessionedSequence]
Species
Mus musculus
Compartment
cytosol
Synonyms
UPF3B, Q3ULL6
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Mus musculus)
Nonsense-Mediated Decay (NMD) (Mus musculus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Mus musculus)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Mus musculus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
SMG6 hydrolyzes mRNA with premature termination codon (Mus musculus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Mus musculus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Mus musculus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Mus musculus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Mus musculus)
Exon Junction:UPF2:UPF3 Complex [cytosol] (Mus musculus)
UPF3 [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
Processing of Capped Intron-Containing Pre-mRNA (Mus musculus)
Transport of Mature Transcript to Cytoplasm (Mus musculus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Mus musculus)
Transport of the export-competent mRNP complex through the NPC (Mus musculus)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Mus musculus)
EJC [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
mRNP complex dissociates from cytosolic face of NPC (Mus musculus)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Mus musculus)
EJC [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
mRNA:CBC:EJC:POLDIP3 [cytosol] (Mus musculus)
EJC [cytosol] (Mus musculus)
Upf3b [cytosol] (Mus musculus)
External Reference Information
External Reference
UniProt:Q3ULL6
Gene Names
Upf3b
Reference Genes
BioGPS Gene:68134 Upf3b
ENSEMBL:ENSMUSG00000036572
ENSEMBL:ENSMUSG00000036572.17 Upf3b
KEGG Gene (Mus musculus):68134 Upf3b
Monarch:68134 Upf3b
NCBI Gene:68134 Upf3b
UCSC:Q3ULL6 Upf3b
Reference Transcript
RefSeq:NM_026573.3 Upf3b
Other Identifiers
10604078
1434842_s_at
17541010
4494084
4530509
4592794
4702882
4762310
4773903
4795149
4888225
5010706
5119638
5195382
5199881
5271022
5308648
5400049
5549671
68134
93240_f_at
93241_r_at
A_51_P162649
A_51_P291139
A_52_P595162
A_55_P1963344
C80366_rc_at
GE1549058
GO:0000184
GO:0003676
GO:0003723
GO:0003729
GO:0005634
GO:0005654
GO:0005730
GO:0005737
GO:0005815
GO:0005829
GO:0005856
GO:0007420
GO:0016071
GO:0030154
GO:0031175
GO:0034451
GO:0035145
GO:0043025
GO:0043226
GO:0045666
GO:0045727
GO:0048856
GO:1905746
ILMN_1235376
ILMN_2494625
mMC004978
Participates
as a member of
UPF3 [cytosol] (Mus musculus)
as a component of
EJC [cytosol] (Mus musculus)
Other forms of this molecule
Upf3b [nucleoplasm]
Inferred From
UPF3B [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_080849.1
Ensembl
ENSMUST00000076265
,
ENSMUSG00000036572
,
ENSMUSP00000075614
MGI
1915384
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text