Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
Alyref [nucleoplasm]
Stable Identifier
R-RNO-156649
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
ALYREF, M0RBB1
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Transcription Termination (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the export-competent mRNP complex through the NPC (Rattus norvegicus)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of Mature mRNAs Derived from Intronless Transcripts (Rattus norvegicus)
Transport of Mature mRNA Derived from an Intronless Transcript (Rattus norvegicus)
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature intronless transcript derived mRNA:TAP:Aly/Ref Complex through the NPC (Rattus norvegicus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the SLBP Dependant Mature mRNA (Rattus norvegicus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature IntronlessTranscript Derived Histone mRNA:SLBP:TAP:Aly/Ref complex through the NPC (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the SLBP independent Mature mRNA (Rattus norvegicus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Transport of the Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex through the NPC (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
mRNA polyadenylation (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B complex (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Alyref [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:M0RBB1
Gene Names
Alyref
Reference Genes
ENSEMBL:ENSRNOG00000036687
ENSEMBL:ENSRNOG00000036687.4 Alyref
Reference Transcript
RefSeq:XM_006247925.3 Alyref
Other Identifiers
10749681
1374897_at
17664022
5870245
5946693
5984714
6219160
6656226
6707123
690585
A_44_P267809
A_64_P151368
A_64_P152627
GO:0003676
GO:0003723
GO:0005634
GO:0005654
GO:0016607
GO:0043226
PH_rn_0007945
Participates
as a component of
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Rattus norvegicus)
as an input of
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Rattus norvegicus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Rattus norvegicus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Rattus norvegicus)
as a member of
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Rattus norvegicus)
Other forms of this molecule
Alyref [cytosol]
Inferred From
ALYREF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_006247987.1
Ensembl
ENSRNOT00000071823
,
ENSRNOP00000066841
,
ENSRNOG00000036687
RGD
1594679
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text