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Upf3b [nucleoplasm]
Stable Identifier
R-RNO-156776
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
UPF3B, A0A0U1RRP3
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Transcription Termination (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Transport of the export-competent mRNP complex through the NPC (Rattus norvegicus)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
mRNA polyadenylation (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
Spliceosomal P complex [nucleoplasm] (Rattus norvegicus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Upf3b [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:A0A0U1RRP3
Gene Names
Upf3b
Reference Genes
BioGPS Gene:313449 Upf3b
ENSEMBL:ENSRNOG00000039994
ENSEMBL:ENSRNOG00000039994.5 Upf3b
Monarch:313449 Upf3b
NCBI Gene:313449 Upf3b
Reference Transcript
RefSeq:XM_006257455.3 Upf3b
Other Identifiers
10932002
1376298_at
17870586
313449
5905030
6077296
6115465
6122867
6145194
6170865
6368205
6410832
6427124
6428237
6451858
6461418
6607123
A_42_P748004
A_44_P405581
GE1180290
GE16222
GO:0000184
GO:0003676
GO:0005634
GO:0007420
GO:0016071
GO:0030154
GO:0031175
GO:0043025
GO:0043226
GO:0045666
GO:0048856
GO:1905746
ILMN_1349703
PH_rn_0007622
Participates
as a component of
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
EJC [nucleoplasm] (Rattus norvegicus)
Other forms of this molecule
Upf3b [cytosol]
Inferred From
UPF3B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_006257517.1
Ensembl
ENSRNOT00000092574
,
ENSRNOG00000039994
,
ENSRNOP00000075758
RGD
1560264
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