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HS(3)-GPC4 [Golgi lumen]
Stable Identifier
R-RNO-2076439
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
Golgi lumen
Synonyms
Q642B0
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
HS2ST1 sulfates IdoA at C2 in heparan sulfate (Rattus norvegicus)
HS(3)-PGs [Golgi lumen] (Rattus norvegicus)
HS(3)-GPC4 [Golgi lumen] (Rattus norvegicus)
HS3ST1 sulfates GlcN at C3 in heparan sulfate (Rattus norvegicus)
HS(3)-PGs [Golgi lumen] (Rattus norvegicus)
HS(3)-GPC4 [Golgi lumen] (Rattus norvegicus)
HS3STs sulfate GlcN at C3 in heparan sulfate (Rattus norvegicus)
HS(3)-PGs [Golgi lumen] (Rattus norvegicus)
HS(3)-GPC4 [Golgi lumen] (Rattus norvegicus)
Some HSPGs are secreted to the plasma membrane (Rattus norvegicus)
HSPGs [Golgi lumen] (Rattus norvegicus)
HS(3)-PGs [Golgi lumen] (Rattus norvegicus)
HS(3)-GPC4 [Golgi lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q642B0
Reference Genes
BioGPS Gene:317322
dbSNP Gene:317322
ENSEMBL:ENSRNOG00000002413
KEGG Gene (Rattus norvegicus):317322
Monarch:317322
NCBI Gene:317322
Reference Transcript
RefSeq:XM_006257580.3
RefSeq:NM_001014108.1
Other Identifiers
10939744
1359399
1392888_at
17879304
317322
5659333
5701219
5706358
5710900
5742383
5836063
5978963
5986915
5996858
6000236
6025960
6121405
6160673
6332280
6393907
6533022
6691198
A_42_P547976
A_43_P21658
AABR07041778
AAH81962
BC081962
ENSRNOG00000002413
ENSRNOP00000003282
ENSRNOT00000003282
EntrezGene:317322
EntrezGene:Gpc4
GE1242550
GE1286745
GE13839
GO:0003674
GO:0005575
GO:0005576
GO:0005623
GO:0005886
GO:0007155
GO:0007165
GO:0008150
GO:0009897
GO:0009966
GO:0009986
GO:0016020
GO:0016477
GO:0022607
GO:0031012
GO:0031225
GO:0040011
GO:0045202
GO:0046658
GO:0048856
GO:0048870
GO:0062023
GO:0098696
GO:0098978
GO:0099026
GO:0099560
GO:1905475
GO:1905606
Gpc4
Gpc4-201
ILMN_1650537
IPR001863
IPR019803
IPR031180
NM_001014108
NP_001014130
PF01153
PH_rn_0008535
rc_AI071251_at
UPI0000250033
XM_006257580
XP_006257642
Participant Of
hasMember
HS(3)-PGs [Golgi lumen]
Other forms of this molecule
GPC4 [plasma membrane]
GPC4 [lysosomal lumen]
HS(6)-GPC4 [lysosomal lumen]
HS(5)-GPC4 [plasma membrane]
XylS-GPC4 [Golgi lumen]
Gal-Xyl-GPC4 [Golgi lumen]
GPC4 [Golgi lumen]
Gal-Gal-Xyl-GPC4 [Golgi lumen]
GlcA-Gal-Gal-Xyl-GPC4 [Golgi lumen]
HS(4)-GPC4 [Golgi lumen]
HS(2)-GPC4 [Golgi lumen]
HS(1)-GPC4 [Golgi lumen]
Heparan(4)-GPC4 [Golgi lumen]
Heparan(3)-GPC4 [Golgi lumen]
Heparan(2)-GPC4 [Golgi lumen]
Heparan(1)-GPC4 [Golgi lumen]
Heparan-GPC4 [Golgi lumen]
HS(5)-GPC4 [Golgi lumen]
HS(6)-GPC4 [Golgi lumen]
HS(4)-GPC4 [plasma membrane]
HS(6)-GPC4 [plasma membrane]
HS(2)-GPC4 [plasma membrane]
HS(1)-GPC4 [plasma membrane]
HS(3)-GPC4 [plasma membrane]
Inferred From
HS(3)-GPC4 [Golgi lumen] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63654) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_006257642.1
,
NP_001014130.1
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