Reactome | Gpc6 [Golgi lumen]

Gpc6 [Golgi lumen]

Stable Identifier

R-RNO-2076534

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

Golgi lumen

Synonyms

Heparan-GPC6, A0A096MJY1

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:A0A096MJY1

Gene Names

Gpc6

Reference Genes

BioGPS Gene:691984 Gpc6

ENSEMBL:ENSRNOG00000046660

ENSEMBL:ENSRNOG00000046660 Gpc6

KEGG Gene (Rattus norvegicus):691984 Gpc6

Monarch:691984 Gpc6

NCBI Gene:691984 Gpc6

Reference Transcript

Other Identifiers

10781999

17700650

5711715

5712513

5791352

6113150

6220851

6345105

6483508

6572549

6601632

6675657

6706085

691984

A_43_P21348

GO:0005575

GO:0005576

GO:0005886

GO:0007155

GO:0007165

GO:0008150

GO:0009966

GO:0009986

GO:0016020

GO:0016477

GO:0022607

GO:0031012

GO:0031225

GO:0040011

GO:0045202

GO:0046658

GO:0048856

GO:0048870

GO:0062023

GO:0098696

GO:0098978

GO:0099560

GO:1905475

GO:1905606

ILMN_1650214

Participant Of

hasMember

Heparan-PGs [Golgi lumen]

Other forms of this molecule

Gpc6 [plasma membrane]

Gpc6 [lysosomal lumen]

Gpc6 [plasma membrane]

Gpc6 [Golgi lumen]

Gpc6 [plasma membrane]

Inferred From

Heparan-GPC6 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63645) at unknown position

Modification

alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_001077762.3, XP_003752892.1

Ensembl

ENSRNOT00000076400, ENSRNOP00000068304, ENSRNOG00000046660

RGD

1593308