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Col28a1 [endoplasmic reticulum lumen]
Stable Identifier
R-RNO-2173021
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
endoplasmic reticulum lumen
Synonyms
5Hyl-COL28A1, D3ZN64
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Rattus norvegicus)
Collagen formation (Rattus norvegicus)
Collagen biosynthesis and modifying enzymes (Rattus norvegicus)
COLGALT1,COLGALT2 bind Lysyl hydroxylated collagen propeptides (Rattus norvegicus)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Galactosylation of collagen propeptide hydroxylysines by PLOD3 (Rattus norvegicus)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Galactosylation of collagen propeptide hydroxylysines by procollagen galactosyltransferases 1, 2. (Rattus norvegicus)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides dissociate from Lysyl hydroxylases (Rattus norvegicus)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
PLOD3 binds Lysyl hydroxylated collagen propeptides (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Rattus norvegicus)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col28a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:D3ZN64
Gene Names
Col28a1
Reference Genes
ENSEMBL:ENSRNOG00000033618
ENSEMBL:ENSRNOG00000033618.6 Col28a1
Reference Transcript
RefSeq:XM_003753867.4 Col28a1
Other Identifiers
10860966
17789648
312115
5641336
5655124
5705931
5764183
5765077
5801618
5836602
5841060
5873786
5877216
5881185
5898736
5904441
5925539
5947293
5968069
6058569
6174907
6246480
6378577
6401221
6428917
6458429
6472936
6556086
6580544
6596171
6623989
6629227
6696703
6724400
A_44_P227332
A_64_P135375
GE1281460
GO:0004867
GO:0005604
GO:0030312
GO:0031012
GO:0098772
ILMN_1356066
PH_rn_0019197
Participates
as a candidate of
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Other forms of this molecule
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [extracellular region]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Col28a1 [endoplasmic reticulum lumen]
Inferred From
5Hyl-COL28A1 [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
XP_003753915.1
Ensembl
ENSRNOT00000045270
,
ENSRNOP00000046298
,
ENSRNOG00000033618
RGD
1564680
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