Reactome | Col9a3 [endoplasmic reticulum lumen]

Col9a3 [endoplasmic reticulum lumen]

Stable Identifier

R-RNO-2179201

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GalHyl-COL9A3, D3ZX71

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:D3ZX71

Gene Names

Col9a3

Reference Genes

BioGPS Gene:362285 Col9a3

ENSEMBL:ENSRNOG00000009531

ENSEMBL:ENSRNOG00000009531 Col9a3

KEGG Gene (Rattus norvegicus):362285 Col9a3

Monarch:362285 Col9a3

NCBI Gene:362285 Col9a3

Reference Transcript

Other Identifiers

10842849

1377631_at

17769602

362285

5634751

5655244

5657191

5725971

5750330

5773288

5842330

5895504

5973731

6005864

6061891

6081215

6087846

6139874

6178675

6188862

6195855

6429016

6442680

6448927

6475639

6488720

6524902

6543331

6545651

6575145

6578811

6602252

6623484

6655514

6656358

A_44_P787524

GE1185216

GO:0000003

GO:0003674

GO:0005198

GO:0005201

GO:0005575

GO:0005576

GO:0005594

GO:0005615

GO:0008150

GO:0008584

GO:0008585

GO:0030198

GO:0031012

GO:0032991

GO:0048856

ILMN_1358312

PH_rn_0014860

PH_rn_0021395

Participant Of

input

Association of procollagen type IX

hasCandidate

3,4-Hyp 5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen]

hasComponent

C-linked procollagen type IX trimer [endoplasmic reticulum lumen]

Other forms of this molecule

Col9a3 [endoplasmic reticulum lumen]

Col9a3 [extracellular region]

Inferred From

3x4Hyp-3Hyp-GalHyl-COL9A3 [endoplasmic reticulum lumen] (Homo sapiens)

Alpha-3(IX) chains [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_003749688.1, XP_003753890.1

Ensembl

ENSRNOT00000013105, ENSRNOG00000009531, ENSRNOP00000013105

RGD

1310255

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